C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007EW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040109-ENSDARG00000071465 CGP 7955 22:16508269-16525842
GeneTranscriptPositionBiotype
ENSDARG00000040109 (dbt)
dihydrolipoamide branched chain transacylase E2
ENSDART00000058662 (dbt-001) 16508269-16519609 protein_coding
ENSDART00000149550 (dbt-002) 16516132-16517135 processed_transcript
ENSDARG00000042701 (trmt13)
tRNA methyltransferase 13 homolog (S. cerevisiae)
ENSDART00000148587 (trmt13-001) 16525380-16533256 protein_coding
ENSDART00000150223 (trmt13-002) 16527785-16533101 processed_transcript
ENSDARG00000071465 (lrrc39)
leucine rich repeat containing 39
ENSDART00000105678 (lrrc39-001) 16522107-16525842 protein_coding
CIL_0007EW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000340-ENSMUSG00000027961 CGP 10090 3:116513070-116583134
GeneTranscriptPositionBiotype
ENSMUSG00000000340 (Dbt)
dihydrolipoamide branched chain transacylase E2
ENSMUST00000000349 (Dbt-001) 116513070-116549976 protein_coding
ENSMUSG00000027961 (Lrrc39)
leucine rich repeat containing 39
ENSMUST00000029573 (Lrrc39-001) 116562978-116583134 protein_coding
ENSMUST00000123785 (Lrrc39-002) 116562973-116573112 retained_intron
ENSMUSG00000034437 (Gm9761)
predicted gene 9761
ENSMUST00000075650 (Gm9761-201) 116561085-116561426 processed_pseudogene
ENSMUSG00000082394 (Gm4596)
predicted gene 4596
ENSMUST00000117197 (Gm4596-001) 116528137-116528578 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EW_0001ENSDARG00000040109ENSDART00000058662ENSDART00000149550ENSDARG00000042701ENSDART00000148587ENSDART00000150223ENSDARG00000071465ENSDART00000105678CIL_0007EW_0002ENSMUSG00000000340ENSMUST00000000349ENSMUSG00000027961ENSMUST00000029573ENSMUST00000123785ENSMUSG00000034437ENSMUST00000075650ENSMUSG00000082394ENSMUST00000117197
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007EW_0001ENSDARG00000040109ENSDART00000058662ENSDARG00000042701ENSDART00000148587ENSDARG00000071465ENSDART00000105678CIL_0007EW_0002ENSMUSG00000000340ENSMUST00000000349ENSMUSG00000027961ENSMUST00000029573ENSMUST00000123785ENSMUSG00000034437ENSMUST00000075650ENSMUSG00000082394ENSMUST00000117197
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040109 ENSDART00000058662 N/A N/A N/A 6.726±2.68 N/A N/A 15.358±7.66 9.489±0.00 1.301±0.00 N/A 3.907±0.00 N/A N/A N/A
ENSDART00000149550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042701 ENSDART00000148587 N/A N/A N/A 3.853±0.73 N/A N/A 3.523±3.26 2.993±1.92 0.655±0.00 N/A 1.674±0.00 N/A N/A N/A
ENSDART00000150223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071465 ENSDART00000105678 N/A N/A N/A N/A N/A N/A 21.945±12.72 0.913±0.00 N/A N/A 7.197±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000340 ENSMUST00000000349 10.418±3.72 21.835±1.81 6.586±0.60 2.808±1.06 9.389±3.30 5.221±1.03 15.168±0.91 26.019±1.25 22.622±11.78 5.284±0.48 8.302±1.37 6.807±2.31 4.205±1.98 1.483±0.24
ENSMUSG00000027961 ENSMUST00000029573 2.314±1.23 0.505±0.18 N/A N/A 3.133±1.64 N/A 9.913±1.94 0.305±0.05 1.748±1.03 0.855±0.17 8.701±2.92 0.804±0.33 1.430±0.33 N/A
ENSMUST00000123785 2.137±0.14 0.505±0.00 N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A 0.529±0.00 N/A N/A
ENSMUSG00000034437 ENSMUST00000075650 1.501±1.11 N/A 0.796±0.71 6.055±4.76 0.490±0.21 0.495±0.04 0.650±0.24 0.555±0.00 5.049±7.72 0.833±0.39 0.207±0.08 3.122±1.90 0.128±0.05 0.441±0.21
ENSMUSG00000082394 ENSMUST00000117197 0.153±0.02 N/A N/A 0.054±0.00 0.208±0.05 N/A 0.215±0.00 0.182±0.07 0.237±0.11 N/A 0.106±0.00 N/A N/A 0.298±0.22

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