C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4596
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117197 Gm4596-001 ENSMUSG00000082394 10090 - 3:116528137-116528578 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverMuscleTestisENSMUST00000117197
Transcript ID Adipose Brain Breast Heart Kidney Liver Muscle Testis
ENSMUST00000117197 0.153±0.02 0.054±0.00 0.208±0.05 0.215±0.00 0.182±0.07 0.237±0.11 0.106±0.00 0.298±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ES CIL_0007ES_0002 CGP 3:116488963-116549976
CIL_0007EW CIL_0007EW_0002 CGP 3:116513070-116583134

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253815 UBE2D2-201 protein_coding Homo_sapiens 0 472
ENST00000321805 UBE2D3-013 protein_coding Homo_sapiens 0 715
ENST00000338145 UBE2D3-006 protein_coding Homo_sapiens 0 715
ENST00000343106 UBE2D3-002 protein_coding Homo_sapiens 0 658
ENST00000349311 UBE2D3-012 protein_coding Homo_sapiens 0 715
ENST00000350435 UBE2D3-014 protein_coding Homo_sapiens 0 676
ENST00000357194 UBE2D3-003 protein_coding Homo_sapiens 0 676
ENST00000394801 UBE2D3-004 protein_coding Homo_sapiens 0 715
ENST00000394803 UBE2D3-005 protein_coding Homo_sapiens 0 715
ENST00000394804 UBE2D3-201 protein_coding Homo_sapiens 0 715
ENST00000398733 UBE2D2-001 protein_coding Homo_sapiens 0 475
ENST00000398734 UBE2D2-004 nonsense_mediated_decay Homo_sapiens 0 475
ENST00000424409 UBE2D3P2-001 processed_pseudogene Homo_sapiens 0 592
ENST00000426992 UBE2D3P3-001 processed_pseudogene Homo_sapiens 4e-33 145
ENST00000436669 UBE2D3P1-001 processed_pseudogene Homo_sapiens 0 660
ENST00000453744 UBE2D3-001 protein_coding Homo_sapiens 0 715
ENST00000502404 UBE2D3-017 protein_coding Homo_sapiens 0 678
ENST00000502563 UBE2D3-027 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000502690 UBE2D3-011 protein_coding Homo_sapiens 0 385
ENST00000503282 UBE2D3-025 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000503418 UBE2D3-021 nonsense_mediated_decay Homo_sapiens 4.2039e-45 185
ENST00000503742 UBE2D3-007 retained_intron Homo_sapiens 0 398
ENST00000504211 UBE2D3-019 protein_coding Homo_sapiens 0 684
ENST00000505007 UBE2D2-003 protein_coding Homo_sapiens 0 403
ENST00000505009 UBE2D3-031 retained_intron Homo_sapiens 0 532
ENST00000505207 UBE2D3-015 protein_coding Homo_sapiens 0 678
ENST00000505307 UBE2D3-022 nonsense_mediated_decay Homo_sapiens 0 468
ENST00000505548 UBE2D2-002 protein_coding Homo_sapiens 0 475
ENST00000507845 UBE2D3-016 protein_coding Homo_sapiens 0 678
ENST00000508238 UBE2D3-009 protein_coding Homo_sapiens 0 473
ENST00000508249 UBE2D3-010 protein_coding Homo_sapiens 0 228
ENST00000508474 UBE2D3-008 retained_intron Homo_sapiens 0 680
ENST00000508476 UBE2D3-018 protein_coding Homo_sapiens 0 453
ENST00000508635 UBE2D3-024 nonsense_mediated_decay Homo_sapiens 0 532
ENST00000508818 UBE2D3-029 retained_intron Homo_sapiens 0 324
ENST00000508974 UBE2D3-026 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000510129 UBE2D3-028 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000510599 UBE2D3-030 retained_intron Homo_sapiens 0 289
ENST00000511691 UBE2D2-008 retained_intron Homo_sapiens 0 394
ENST00000511725 UBE2D2-006 protein_coding Homo_sapiens 0 472
ENST00000513098 UBE2D3-023 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000514755 UBE2D3-020 nonsense_mediated_decay Homo_sapiens 0 283
ENST00000618836 UBE2D3-202 protein_coding Homo_sapiens 0 682

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