C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007FH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141682-ENSG00000166603 CGP 9606 18:59899948-60372775
GeneTranscriptPositionBiotype
ENSG00000141682 (PMAIP1)
phorbol-12-myristate-13-acetate-induced protein 1 		ENST00000269518 (PMAIP1-002) 59900016-59903537 protein_coding
ENST00000316660 (PMAIP1-001) 59899948-59904306 protein_coding
ENST00000590596 (PMAIP1-003) 59900036-59902963 retained_intron
ENSG00000166603 (MC4R)
melanocortin 4 receptor 		ENST00000299766 (MC4R-001) 60371110-60372775 protein_coding
ENSG00000239398 (RN7SL342P)
RNA, 7SL, cytoplasmic 342, pseudogene 		ENST00000479616 (RN7SL342P-201) 59972914-59973207 misc_RNA
ENSG00000242060 (RPS3AP49)
ribosomal protein S3a pseudogene 49 		ENST00000472161 (RPS3AP49-001) 60149576-60150365 processed_pseudogene
ENSG00000256704 (SDCCAG3P1)
serologically defined colon cancer antigen 3 pseudogene 1 		ENST00000589292 (SDCCAG3P1-001) 60009994-60011143 processed_pseudogene
ENSG00000267401 (RP11-396N11.1)
 ENST00000592121 (RP11-396N11.1-001) 60294151-60301118 lincRNA
ENSG00000267462 (RP11-866E20.3)
 ENST00000585691 (RP11-866E20.3-001) 60010281-60014258 lincRNA
ENSG00000267497 (NFE2L3P1)
nuclear factor, erythroid 2-like 3 pseudogene 1 		ENST00000588207 (NFE2L3P1-001) 59969438-59971396 processed_pseudogene
ENSG00000267620 (RP11-795H16.2)
 ENST00000585803 (RP11-795H16.2-001) 60196555-60198172 processed_pseudogene
ENSG00000267686 (RP11-795H16.3)
 ENST00000588794 (RP11-795H16.3-001) 60125033-60161195 lincRNA
ENSG00000267742 (FAM60CP)
family with sequence similarity 60, member C pseudogene 		ENST00000591086 (FAM60CP-001) 60016778-60017441 processed_pseudogene
CIL_0007FH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024521-ENSMUSG00000047259 CGP 10090 18:66458604-66860472
GeneTranscriptPositionBiotype
ENSMUSG00000024521 (Pmaip1)
phorbol-12-myristate-13-acetate-induced protein 1 		ENSMUST00000025399 (Pmaip1-201) 66458604-66465550 protein_coding
ENSMUSG00000047259 (Mc4r)
melanocortin 4 receptor 		ENSMUST00000057942 (Mc4r-201) 66857715-66860472 protein_coding
ENSMUSG00000088187 (Gm22219)
predicted gene, 22219 		ENSMUST00000157562 (Gm22219-201) 66676361-66676679 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FH_0001ENSG00000141682ENST00000269518ENST00000316660ENST00000590596ENSG00000166603ENST00000299766ENSG00000239398ENST00000479616ENSG00000242060ENST00000472161ENSG00000256704ENST00000589292ENSG00000267401ENST00000592121ENSG00000267462ENST00000585691ENSG00000267497ENST00000588207ENSG00000267620ENST00000585803ENSG00000267686ENST00000588794ENSG00000267742ENST00000591086CIL_0007FH_0002ENSMUSG00000024521ENSMUST00000025399ENSMUSG00000047259ENSMUST00000057942ENSMUSG00000088187ENSMUST00000157562
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007FH_0001ENSG00000141682ENST00000269518ENST00000316660ENST00000590596ENSG00000166603ENST00000299766ENSG00000239398ENST00000479616ENSG00000242060ENST00000472161ENSG00000256704ENST00000589292ENSG00000267401ENST00000592121ENSG00000267462ENST00000585691ENSG00000267497ENST00000588207ENSG00000267620ENST00000585803ENSG00000267686ENST00000588794ENSG00000267742ENST00000591086CIL_0007FH_0002ENSMUSG00000024521ENSMUST00000025399ENSMUSG00000047259ENSMUST00000057942ENSMUSG00000088187ENSMUST00000157562
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141682 ENST00000269518 0.228±0.00 0.792±0.00 0.221±0.00 0.214±0.00 0.235±0.00 0.196±0.06 0.117±0.05 0.043±0.00 N/A 2.050±0.00 N/A 1.161±0.88 2.660±0.00 1.155±0.00
ENST00000316660 0.253±0.00 1.973±0.00 N/A 0.433±0.28 0.639±0.23 0.219±0.17 0.031±0.00 0.390±0.00 0.234±0.01 2.189±1.68 0.231±0.00 2.119±1.21 4.218±1.43 2.091±1.42
ENST00000590596 N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166603 ENST00000299766 N/A 0.127±0.00 N/A 0.785±0.16 N/A N/A N/A 0.140±0.00 0.026±0.00 N/A N/A 0.028±0.01 N/A 0.070±0.01
ENSG00000239398 ENST00000479616 0.064±0.00 0.200±0.00 N/A 0.075±0.00 0.564±0.00 N/A 0.063±0.00 0.071±0.00 0.123±0.00 N/A N/A N/A N/A N/A
ENSG00000242060 ENST00000472161 0.155±0.00 0.408±0.00 N/A 0.175±0.00 0.254±0.00 0.236±0.00 0.057±0.00 0.177±0.00 0.058±0.00 0.197±0.00 0.100±0.00 0.135±0.15 N/A 0.128±0.06
ENSG00000256704 ENST00000589292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00
ENSG00000267401 ENST00000592121 0.214±0.00 0.265±0.00 N/A 0.272±0.00 0.075±0.00 0.103±0.00 0.035±0.00 0.190±0.00 0.034±0.00 0.036±0.00 0.034±0.00 N/A N/A 0.988±0.52
ENSG00000267462 ENST00000585691 0.091±0.00 0.253±0.00 N/A 0.052±0.00 0.073±0.00 0.092±0.00 0.008±0.00 0.034±0.00 N/A 0.069±0.03 0.022±0.00 0.079±0.03 0.029±0.00 0.987±0.79
ENSG00000267497 ENST00000588207 0.083±0.00 0.359±0.00 0.193±0.00 0.052±0.02 0.160±0.06 0.120±0.00 0.069±0.01 0.187±0.07 0.045±0.02 0.101±0.09 0.055±0.00 0.117±0.07 0.013±0.00 0.250±0.08
ENSG00000267620 ENST00000585803 N/A N/A N/A 0.007±0.00 0.007±0.00 N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A 0.012±0.00
ENSG00000267686 ENST00000588794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 0.022±0.00
ENSG00000267742 ENST00000591086 N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A 0.047±0.01 0.033±0.00 0.068±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024521 ENSMUST00000025399 1.200±0.94 0.311±0.16 1.983±0.21 0.479±0.28 1.882±1.28 7.431±2.34 0.075±0.03 3.715±0.56 0.498±0.41 3.062±0.14 0.068±0.08 0.703±0.30 4.516±2.28 0.540±0.19
ENSMUSG00000047259 ENSMUST00000057942 0.510±0.10 N/A 0.027±0.00 2.038±1.72 N/A 0.055±0.03 0.011±0.00 0.088±0.04 0.006±0.00 N/A N/A 0.106±0.10 0.013±0.01 0.075±0.05
ENSMUSG00000088187 ENSMUST00000157562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.529±0.43

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