C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3a pseudogene 49
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472161 RPS3AP49-001 ENSG00000242060 9606 + 18:60149576-60150365 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000472161
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000472161 0.155±0.00 0.408±0.00 0.175±0.00 0.254±0.00 0.236±0.00 0.057±0.00 0.177±0.00 0.058±0.00 0.197±0.00 0.100±0.00 0.135±0.15 0.128±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FH CIL_0007FH_0001 CGP 18:59899948-60372775

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074680 Rps3a3-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000029722 Rps3a1-001 protein_coding Mus_musculus 0 876
ENSMUST00000074245 Rps3a2-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000119822 Gm13408-001 processed_pseudogene Mus_musculus 0 830
ENSMUST00000121639 Gm13508-001 processed_pseudogene Mus_musculus 0 647

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