C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007MD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
SMAD2 UCNEbase 9606 18:47244201-47687108
GeneTranscriptPositionBiotype
ENSG00000215474 (SKOR2)
SKI family transcriptional corepressor 2
ENST00000400404 (SKOR2-001) 47231123-47249183 protein_coding
ENST00000425639 (SKOR2-002) 47219922-47249183 protein_coding
ENST00000620245 (SKOR2-201) 47212089-47249183 protein_coding
ENSG00000267156 (TPMTP1)
thiopurine S-methyltransferase pseudogene 1
ENST00000592307 (TPMTP1-001) 47630112-47630848 processed_pseudogene
ENSG00000279367 (RP11-157P23.1)
ENST00000625076 (RP11-157P23.1-001) 47501172-47503106 TEC
CIL_0007MD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
SMAD2 UCNEbase 10090 18:76423583-76863422
GeneTranscriptPositionBiotype
ENSMUSG00000091519 (Skor2)
SKI family transcriptional corepressor 2
ENSMUST00000166956 (Skor2-201) 76856405-76900342 protein_coding
CIL_0007MD_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
SMAD2 UCNEbase 7955 10:14581808-14874955
GeneTranscriptPositionBiotype
ENSDARG00000063614 (SKOR2)
ENSDART00000101289 (SKOR2-201) 14576488-14586634 protein_coding
ENSDART00000124640 (SKOR2-202) 14577322-14585552 protein_coding
ENSDART00000126643 (SKOR2-203) 14584656-14585552 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisCIL_0007MD_0001ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267156ENST00000592307ENSG00000279367ENST00000625076CIL_0007MD_0002ENSMUSG00000091519ENSMUST00000166956CIL_0007MD_0003ENSDARG00000063614ENSDART00000101289ENSDART00000124640ENSDART00000126643
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisCIL_0007MD_0001ENSG00000215474ENST00000400404ENST00000425639ENST00000620245ENSG00000267156ENST00000592307ENSG00000279367ENST00000625076CIL_0007MD_0002ENSMUSG00000091519ENSMUST00000166956CIL_0007MD_0003ENSDARG00000063614ENSDART00000101289ENSDART00000124640
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSG00000215474 ENST00000400404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.638±0.00
ENST00000425639 N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.854±0.00
ENST00000620245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.685±0.04
ENSG00000267156 ENST00000592307 0.180±0.00 0.181±0.00 0.500±0.00 0.144±0.00 0.566±0.00 0.410±0.00 0.843±0.00 0.903±0.00 0.169±0.00 0.039±0.00 0.072±0.00 0.084±0.05
ENSG00000279367 ENST00000625076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSMUSG00000091519 ENSMUST00000166956 N/A N/A 0.590±0.50 N/A N/A N/A N/A 0.003±0.00 N/A N/A N/A 0.022±0.02
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENSDARG00000063614 ENSDART00000101289 N/A N/A N/A N/A N/A 0.146±0.00 0.160±0.00 N/A N/A N/A N/A N/A
ENSDART00000124640 N/A N/A 0.566±0.00 N/A N/A N/A 0.030±0.00 0.016±0.00 N/A N/A N/A N/A
ENSDART00000126643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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