C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007MO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
MIR4307 UCNEbase 9606 14:26444297-26871605
GeneTranscriptPositionBiotype
ENSG00000139910 (NOVA1)
neuro-oncological ventral antigen 1 		ENST00000344429 (NOVA1-001) 26470118-26597440 protein_coding
ENST00000347476 (NOVA1-012) 26448718-26595499 protein_coding
ENST00000449198 (NOVA1-007) 26448528-26596075 protein_coding
ENST00000465357 (NOVA1-002) 26445888-26597486 protein_coding
ENST00000483536 (NOVA1-004) 26443093-26597519 nonsense_mediated_decay
ENST00000539517 (NOVA1-003) 26445889-26597754 protein_coding
ENST00000546546 (NOVA1-011) 26448734-26595473 nonsense_mediated_decay
ENST00000547415 (NOVA1-009) 26549351-26595478 retained_intron
ENST00000547619 (NOVA1-010) 26471951-26597495 protein_coding
ENST00000549146 (NOVA1-008) 26448828-26595626 protein_coding
ENST00000549571 (NOVA1-006) 26448852-26597082 protein_coding
ENST00000551754 (NOVA1-005) 26519199-26595461 processed_transcript
ENST00000574031 (NOVA1-013) 26479017-26597460 protein_coding
ENSG00000257185 (RP11-626P14.2)
 ENST00000548335 (RP11-626P14.2-001) 26809417-26820703 lincRNA
ENST00000548385 (RP11-626P14.2-002) 26816968-26836458 lincRNA
ENSG00000257842 (NOVA1-AS1)
NOVA1 antisense RNA 1 (head to head) 		ENST00000547786 (NOVA1-AS1-001) 26598412-26664407 antisense
ENST00000548328 (NOVA1-AS1-004) 26735354-26806467 antisense
ENST00000552101 (NOVA1-AS1-003) 26782168-26806467 antisense
ENST00000552826 (NOVA1-AS1-002) 26637241-26806381 antisense
ENSG00000257845 (RP11-626P14.1)
 ENST00000549330 (RP11-626P14.1-001) 26775495-26822107 lincRNA
ENSG00000258081 (RP11-384J4.2)
 ENST00000550024 (RP11-384J4.2-001) 26836728-26933772 lincRNA
ENST00000552303 (RP11-384J4.2-002) 26843452-27160420 lincRNA
ENSG00000262119 (RP11-483C6.1)
 ENST00000572358 (RP11-483C6.1-001) 26592747-26594517 sense_intronic
CIL_0007MO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
MIR4307 UCNEbase 10090 12:46696283-47163531
GeneTranscriptPositionBiotype
ENSMUSG00000021047 (Nova1)
neuro-oncological ventral antigen 1 		ENSMUST00000021438 (Nova1-201) 46694517-46818775 protein_coding
ENSMUSG00000089227 (Gm25051)
predicted gene, 25051 		ENSMUST00000158602 (Gm25051-201) 46832559-46832807 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007MO_0001ENSG00000139910ENST00000344429ENST00000347476ENST00000449198ENST00000465357ENST00000483536ENST00000539517ENST00000546546ENST00000547415ENST00000547619ENST00000549146ENST00000549571ENST00000551754ENST00000574031ENSG00000257185ENST00000548335ENST00000548385ENSG00000257842ENST00000547786ENST00000548328ENST00000552101ENST00000552826ENSG00000257845ENST00000549330ENSG00000258081ENST00000550024ENST00000552303ENSG00000262119ENST00000572358CIL_0007MO_0002ENSMUSG00000021047ENSMUST00000021438ENSMUSG00000089227ENSMUST00000158602
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007MO_0001ENSG00000139910ENST00000344429ENST00000449198ENST00000465357ENST00000483536ENST00000539517ENST00000546546ENST00000547415ENST00000547619ENST00000549146ENST00000574031ENSG00000257185ENST00000548335ENST00000548385ENSG00000257842ENST00000547786ENST00000548328ENST00000552101ENSG00000257845ENST00000549330ENSG00000258081ENST00000550024ENST00000552303ENSG00000262119ENST00000572358CIL_0007MO_0002ENSMUSG00000021047ENSMUST00000021438ENSMUSG00000089227ENSMUST00000158602
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139910 ENST00000344429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 3.499±0.00
ENST00000347476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449198 N/A N/A N/A N/A N/A N/A 0.177±0.00 N/A N/A 0.459±0.00 N/A N/A 0.061±0.00 N/A
ENST00000465357 N/A N/A N/A 3.119±0.00 0.873±0.00 0.608±0.00 N/A 0.183±0.00 0.055±0.00 N/A N/A 0.331±0.01 N/A 3.255±0.00
ENST00000483536 2.221±0.00 N/A N/A 1.089±0.00 0.622±0.00 1.151±0.00 0.067±0.00 N/A 0.014±0.00 0.083±0.00 N/A 0.128±0.10 0.011±0.00 N/A
ENST00000539517 6.561±0.00 1.269±0.00 0.324±0.00 4.170±1.84 2.539±2.09 3.325±0.00 0.294±0.23 1.786±0.00 1.012±0.00 0.359±0.15 0.585±0.00 0.656±0.45 0.036±0.02 3.518±1.50
ENST00000546546 N/A N/A N/A N/A 4.491±0.00 N/A N/A N/A N/A 0.909±0.00 N/A N/A N/A N/A
ENST00000547415 N/A N/A 1.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547619 N/A N/A N/A N/A 2.077±0.00 N/A 0.231±0.00 N/A N/A N/A N/A 0.421±0.00 N/A N/A
ENST00000549146 N/A 4.010±0.00 N/A N/A N/A N/A N/A N/A 0.146±0.00 N/A 2.239±0.00 N/A N/A N/A
ENST00000549571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574031 N/A N/A N/A N/A N/A N/A N/A 0.075±0.00 N/A 0.124±0.00 N/A N/A N/A N/A
ENSG00000257185 ENST00000548335 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.533±0.00
ENST00000548385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.795±0.00
ENSG00000257842 ENST00000547786 N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.511±0.11
ENST00000548328 N/A N/A 1.458±0.00 0.026±0.00 N/A 0.915±0.85 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552101 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257845 ENST00000549330 N/A N/A N/A 0.038±0.00 N/A N/A N/A 0.965±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000258081 ENST00000550024 0.249±0.00 0.131±0.00 N/A 0.194±0.00 N/A N/A 0.511±0.00 0.117±0.00 N/A 0.884±0.00 N/A 0.065±0.00 0.139±0.01 0.356±0.00
ENST00000552303 0.057±0.00 0.227±0.00 N/A 0.059±0.00 0.152±0.00 0.028±0.00 N/A N/A N/A 0.107±0.00 0.026±0.00 N/A N/A 0.196±0.00
ENSG00000262119 ENST00000572358 0.180±0.00 0.162±0.00 0.076±0.00 0.133±0.03 0.563±0.04 0.251±0.18 0.059±0.03 0.073±0.00 0.657±0.00 0.370±0.00 N/A 0.043±0.01 N/A 0.452±0.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021047 ENSMUST00000021438 3.697±1.40 1.404±0.41 0.278±0.04 26.979±16.02 3.565±1.82 0.704±0.18 0.628±0.06 0.228±0.08 0.090±0.04 1.695±0.29 0.361±0.09 1.915±0.93 0.081±0.10 0.374±0.18
ENSMUSG00000089227 ENSMUST00000158602 N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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