C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0007SH_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs631 | VISTA | 9606 | 8:36800333-37401205  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000215262  (KCNU1)potassium channel, subfamily U, member 1 |
ENST00000399881 (KCNU1-001)
|
36784374-36936128 | protein_coding | |
|
ENST00000518904 (KCNU1-009)
|
36928905-36931145 | protein_coding | ||
|
ENST00000522372 (KCNU1-002)
|
36784383-36936125 | nonsense_mediated_decay | ||
|
ENST00000522417 (KCNU1-003)
|
36784399-36807404 | nonsense_mediated_decay | ||
|
ENST00000523973 (KCNU1-005)
|
36784324-36814400 | protein_coding | ||
|
ENSG00000219491 (TPT1P8) tumor protein, translationally-controlled 1 pseudogene 8 |
ENST00000510120 (TPT1P8-001)
|
36888482-36889307 | unprocessed_pseudogene | |
|
ENSG00000243503 (AC090453.1) |
ENST00000495560 (AC090453.1-001)
|
36987977-36988412 | processed_pseudogene | |
|
ENSG00000253123 (RP11-527N22.1) |
ENST00000518765 (RP11-527N22.1-002)
|
37330672-37331984 | lincRNA | |
|
ENST00000624599 (RP11-527N22.1-001)
|
37326575-37330837 | TEC | ||
|
ENSG00000254038 (RP11-419C23.1) |
ENST00000523411 (RP11-419C23.1-001)
|
37067441-37069418 | lincRNA | |
| CIL_0007SH_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs631 | VISTA | 10090 | 8:26084787-26685647 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000013878 (Rnf170) ring finger protein 170 |
ENSMUST00000014022 (Rnf170-001)
|
26119368-26143871 | protein_coding | |
|
ENSMUST00000110573 (Rnf170-007)
|
26120480-26126239 | protein_coding | ||
|
ENSMUST00000110575 (Rnf170-005)
|
26119476-26129546 | protein_coding | ||
|
ENSMUST00000110579 (Rnf170-003)
|
26119566-26142648 | nonsense_mediated_decay | ||
|
ENSMUST00000124757 (Rnf170-002)
|
26119380-26141325 | nonsense_mediated_decay | ||
|
ENSMUST00000124867 (Rnf170-004)
|
26123877-26141078 | nonsense_mediated_decay | ||
|
ENSMUST00000131138 (Rnf170-009)
|
26119388-26129155 | protein_coding | ||
|
ENSMUST00000140819 (Rnf170-008)
|
26119664-26129155 | protein_coding | ||
|
ENSMUST00000153528 (Rnf170-006)
|
26119383-26141124 | protein_coding | ||
|
ENSMUSG00000037214 (Thap1) THAP domain containing, apoptosis associated protein 1 |
ENSMUST00000036807 (Thap1-001)
|
26158212-26162940 | protein_coding | |
|
ENSMUST00000127536 (Thap1-003)
|
26158255-26159412 | retained_intron | ||
|
ENSMUST00000130231 (Thap1-002)
|
26158233-26162775 | protein_coding | ||
|
ENSMUSG00000037234 (Hook3) hook homolog 3 (Drosophila) |
ENSMUST00000037182 (Hook3-001)
|
26021421-26119224 | protein_coding | |
|
ENSMUST00000147613 (Hook3-002)
|
26038080-26070275 | protein_coding | ||
|
ENSMUST00000152144 (Hook3-003)
|
26038089-26044570 | retained_intron | ||
Expression Patterns
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