C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007Z4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm745 VISTA 9606 9:86601211-87204420
GeneTranscriptPositionBiotype
ENSG00000180447 (GAS1)
growth arrest-specific 1 		ENST00000298743 (GAS1-001) 86944363-86947189 protein_coding
ENSG00000204446 (C9orf170)
chromosome 9 open reading frame 170 		ENST00000375941 (C9orf170-201) 87148644-87159726 protein_coding
ENST00000623052 (C9orf170-001) 87148644-87159556 lincRNA
ENSG00000224887 (RP11-276H19.4)
 ENST00000437925 (RP11-276H19.4-001) 87084161-87085151 processed_pseudogene
ENSG00000226237 (RP11-276H19.1)
 ENST00000415801 (RP11-276H19.1-001) 86948699-87002033 lincRNA
ENSG00000231007 (CDC20P1)
cell division cycle 20 pseudogene 1 		ENST00000488829 (CDC20P1-001) 87011652-87013151 processed_pseudogene
ENSG00000232211 (RP11-395D3.1)
 ENST00000443163 (RP11-395D3.1-001) 86632147-86696496 lincRNA
ENSG00000269994 (RP11-276H19.2)
 ENST00000602579 (RP11-276H19.2-001) 87008455-87042126 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007Z4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm745 VISTA 10090 13:59845681-60449199
GeneTranscriptPositionBiotype
ENSMUSG00000050765 (Gm5084)
predicted gene 5084 		ENSMUST00000060705 (Gm5084-201) 60211933-60212934 protein_coding
ENSMUSG00000052957 (Gas1)
growth arrest specific 1 		ENSMUST00000065086 (Gas1-001) 60174405-60177365 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Z4_0001ENSG00000180447ENST00000298743ENSG00000204446ENST00000375941ENST00000623052ENSG00000224887ENST00000437925ENSG00000226237ENST00000415801ENSG00000231007ENST00000488829ENSG00000232211ENST00000443163ENSG00000269994ENST00000602579CIL_0007Z4_0002ENSMUSG00000050765ENSMUST00000060705ENSMUSG00000052957ENSMUST00000065086
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Z4_0001ENSG00000180447ENST00000298743ENSG00000204446ENST00000375941ENST00000623052ENSG00000224887ENST00000437925ENSG00000226237ENST00000415801ENSG00000231007ENST00000488829ENSG00000232211ENST00000443163ENSG00000269994ENST00000602579CIL_0007Z4_0002ENSMUSG00000050765ENSMUST00000060705ENSMUSG00000052957ENSMUST00000065086
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000180447 ENST00000298743 11.919±0.00 7.334±0.00 0.977±0.00 1.445±0.33 11.292±6.61 7.586±4.81 4.531±2.65 5.898±5.75 1.205±0.32 2.831±0.64 4.240±0.69 18.210±16.08 33.283±12.94 8.943±7.91
ENSG00000204446 ENST00000375941 N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 0.260±0.00 N/A N/A 0.057±0.00 N/A N/A
ENST00000623052 0.018±0.00 0.050±0.00 N/A 0.098±0.01 0.008±0.00 0.009±0.00 0.010±0.00 0.019±0.00 N/A 0.045±0.02 0.100±0.02 0.024±0.02 0.071±0.03 0.105±0.01
ENSG00000224887 ENST00000437925 N/A N/A N/A 0.021±0.00 N/A N/A 0.017±0.00 N/A 0.017±0.00 0.018±0.00 N/A N/A N/A 0.863±0.67
ENSG00000226237 ENST00000415801 0.006±0.00 0.073±0.00 0.272±0.00 0.059±0.00 0.136±0.01 0.131±0.06 0.048±0.01 0.070±0.01 0.202±0.19 0.220±0.12 0.045±0.00 0.168±0.15 0.075±0.06 0.131±0.03
ENSG00000231007 ENST00000488829 0.054±0.00 0.147±0.00 0.542±0.00 0.102±0.07 0.552±0.00 N/A 0.041±0.00 N/A 0.127±0.00 0.044±0.00 N/A 0.998±0.06 0.437±0.35 0.519±0.21
ENSG00000232211 ENST00000443163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.024±0.00
ENSG00000269994 ENST00000602579 0.035±0.00 0.056±0.00 0.263±0.00 0.119±0.06 0.026±0.00 0.061±0.00 0.090±0.02 0.453±0.00 0.030±0.00 0.046±0.03 0.060±0.00 0.045±0.03 0.944±0.33 0.091±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000050765 ENSMUST00000060705 0.091±0.05 0.183±0.05 0.109±0.00 0.023±0.00 0.113±0.02 0.131±0.04 0.032±0.00 N/A N/A 0.176±0.12 0.038±0.01 0.652±0.39 0.032±0.01 0.051±0.02
ENSMUSG00000052957 ENSMUST00000065086 83.138±53.83 55.966±9.56 78.416±18.36 11.726±8.09 28.615±15.38 32.987±3.29 8.530±1.34 16.863±3.79 5.675±4.02 24.932±5.66 4.238±0.74 133.424±62.18 5.236±6.04 1.670±0.96

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