C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007Z6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm653 VISTA 9606 7:41404793-42006682
GeneTranscriptPositionBiotype
ENSG00000106571 (GLI3)
GLI family zinc finger 3
ENST00000395925 (GLI3-001) 41960950-42237013 protein_coding
ENST00000428534 (GLI3-003) 42222800-42237870 retained_intron
ENST00000437480 (GLI3-004) 42172491-42237059 protein_coding
ENST00000448703 (GLI3-005) 42048630-42227721 protein_coding
ENST00000464291 (GLI3-006) 41972440-41977922 retained_intron
ENST00000479210 (GLI3-002) 41964082-42152453 processed_transcript
ENSG00000122641 (INHBA)
inhibin, beta A
ENST00000242208 (INHBA-001) 41685114-41703108 protein_coding
ENST00000442711 (INHBA-002) 41689534-41700609 protein_coding
ENST00000464515 (INHBA-003) 41689516-41692564 processed_transcript
ENSG00000224116 (INHBA-AS1)
INHBA antisense RNA 1
ENST00000415848 (INHBA-AS1-001) 41693916-41779388 antisense
ENST00000420821 (INHBA-AS1-003) 41693948-41713194 antisense
ENST00000422822 (INHBA-AS1-002) 41693937-41712757 antisense
ENSG00000236310 (AC005027.3)
ENST00000416150 (AC005027.3-001) 41667168-41705335 sense_overlapping
CIL_0007Z6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm653 VISTA 10090 13:15711020-16312852
GeneTranscriptPositionBiotype
ENSMUSG00000021318 (Gli3)
GLI-Kruppel family member GLI3
ENSMUST00000110510 (Gli3-001) 15463980-15730026 protein_coding
ENSMUST00000130065 (Gli3-003) 15463235-15715091 protein_coding
ENSMUST00000130535 (Gli3-002) 15463723-15663518 retained_intron
ENSMUST00000141194 (Gli3-004) 15463251-15641270 processed_transcript
ENSMUSG00000041324 (Inhba)
inhibin beta-A
ENSMUST00000042603 (Inhba-201) 16011851-16027188 protein_coding
ENSMUST00000164993 (Inhba-202) 16014475-16027211 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Z6_0001ENSG00000106571ENST00000395925ENST00000428534ENST00000437480ENST00000448703ENST00000464291ENST00000479210ENSG00000122641ENST00000242208ENST00000442711ENST00000464515ENSG00000224116ENST00000415848ENST00000420821ENST00000422822ENSG00000236310ENST00000416150CIL_0007Z6_0002ENSMUSG00000021318ENSMUST00000110510ENSMUST00000130065ENSMUST00000130535ENSMUST00000141194ENSMUSG00000041324ENSMUST00000042603ENSMUST00000164993
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007Z6_0001ENSG00000106571ENST00000395925ENST00000448703ENST00000479210ENSG00000122641ENST00000242208ENST00000442711ENST00000464515ENSG00000224116ENST00000415848ENST00000420821ENST00000422822ENSG00000236310ENST00000416150CIL_0007Z6_0002ENSMUSG00000021318ENSMUST00000110510ENSMUST00000130065ENSMUST00000130535ENSMUSG00000041324ENSMUST00000042603ENSMUST00000164993
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106571 ENST00000395925 2.729±0.00 1.039±0.00 0.364±0.00 0.497±0.21 1.615±0.00 1.009±0.89 0.350±0.28 0.361±0.27 0.390±0.00 0.543±0.44 0.416±0.00 1.460±0.02 3.047±0.56 0.892±0.46
ENST00000428534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448703 N/A N/A N/A N/A N/A 1.391±0.00 0.192±0.00 0.599±0.00 N/A N/A N/A N/A N/A N/A
ENST00000464291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479210 N/A N/A N/A N/A N/A N/A 0.078±0.00 0.028±0.00 N/A 0.813±0.00 0.276±0.00 N/A N/A 0.862±0.00
ENSG00000122641 ENST00000242208 0.493±0.00 N/A N/A 0.278±0.00 3.652±0.00 0.274±0.00 0.514±0.00 N/A 0.528±0.36 1.802±0.00 N/A 2.138±1.48 10.937±6.40 2.934±2.32
ENST00000442711 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A 0.764±0.00 6.440±0.00 0.487±0.00 7.693±6.13 18.207±0.00 4.388±0.00
ENST00000464515 N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224116 ENST00000415848 N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.029±0.00 0.011±0.00 0.029±0.00
ENST00000420821 0.102±0.00 0.097±0.00 N/A 0.413±0.05 0.041±0.00 0.026±0.00 0.022±0.00 N/A 0.012±0.00 N/A 0.004±0.00 0.043±0.03 0.033±0.01 0.110±0.03
ENST00000422822 N/A 0.125±0.00 N/A 0.483±0.07 N/A N/A 0.021±0.00 0.062±0.00 0.008±0.00 0.048±0.00 N/A 0.062±0.02 0.038±0.00 N/A
ENSG00000236310 ENST00000416150 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.068±0.00 0.104±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021318 ENSMUST00000110510 2.285±1.12 0.878±0.37 2.172±0.47 1.370±0.94 0.943±0.27 0.892±0.25 0.337±0.01 0.188±0.09 0.113±0.07 0.757±0.36 0.145±0.04 1.437±0.61 0.354±0.20 0.218±0.14
ENSMUST00000130065 0.466±0.00 N/A N/A 0.683±0.00 1.369±0.51 N/A 0.437±0.22 0.282±0.11 N/A 0.451±0.00 N/A 0.456±0.00 0.255±0.03 0.232±0.08
ENSMUST00000130535 N/A 0.440±0.06 N/A N/A 0.633±0.03 0.593±0.10 N/A 0.094±0.01 0.039±0.01 N/A N/A 0.723±0.15 N/A N/A
ENSMUST00000141194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041324 ENSMUST00000042603 N/A 0.088±0.00 N/A 0.816±0.00 N/A 0.158±0.05 0.118±0.00 N/A 0.215±0.14 0.090±0.00 0.099±0.00 N/A N/A N/A
ENSMUST00000164993 0.358±0.26 0.256±0.11 0.281±0.04 0.249±0.01 0.158±0.07 0.422±0.05 0.309±0.10 0.187±0.05 1.612±1.42 0.430±0.13 0.079±0.03 48.429±13.82 5.599±5.16 0.138±0.05

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