C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000805_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs831 VISTA 9606 2:66754125-67355408
GeneTranscriptPositionBiotype
ENSG00000223859 (AC007403.3)
 ENST00000427579 (AC007403.3-001) 67040546-67041966 lincRNA
ENSG00000224071 (AC009474.1)
 ENST00000455096 (AC009474.1-001) 66820684-66822570 processed_pseudogene
ENSG00000230355 (AC009474.2)
 ENST00000451383 (AC009474.2-001) 66881087-66881222 processed_pseudogene
ENSG00000230525 (AC007403.2)
 ENST00000411701 (AC007403.2-001) 66921694-66958920 lincRNA
ENST00000426260 (AC007403.2-002) 66904436-66971462 lincRNA
ENSG00000232688 (AC007403.1)
 ENST00000444266 (AC007403.1-001) 66921510-66922457 lincRNA
ENSG00000235885 (AC023115.2)
 ENST00000445514 (AC023115.2-006) 67213408-67244574 lincRNA
ENST00000450294 (AC023115.2-001) 67260803-67289394 lincRNA
ENST00000452716 (AC023115.2-002) 67086446-67296075 lincRNA
ENST00000593336 (AC023115.2-004) 67261066-67289370 lincRNA
ENST00000594329 (AC023115.2-005) 67087013-67257966 lincRNA
ENST00000598583 (AC023115.2-003) 67261066-67289238 lincRNA
ENST00000618608 (AC023115.2-007) 67252618-67261170 lincRNA
ENSG00000236605 (AC023115.4)
 ENST00000450944 (AC023115.4-001) 67324627-67325304 lincRNA
ENSG00000236780 (AC078941.1)
 ENST00000414404 (AC078941.1-002) 67175423-67215277 lincRNA
ENST00000433133 (AC078941.1-001) 67123357-67215319 lincRNA
ENST00000447453 (AC078941.1-003) 67124670-67177992 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000805_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs831 VISTA 10090 11:18056946-18658282
GeneTranscriptPositionBiotype
ENSMUSG00000080826 (Gm12019)
predicted gene 12019 		ENSMUST00000121258 (Gm12019-001) 18206413-18206944 processed_pseudogene
ENSMUSG00000081101 (Gm12024)
predicted gene 12024 		ENSMUST00000118819 (Gm12024-001) 18577227-18578479 processed_pseudogene
ENSMUSG00000081302 (Gm12020)
predicted gene 12020 		ENSMUST00000119030 (Gm12020-001) 18325630-18327671 processed_pseudogene
ENSMUSG00000082852 (Gm12021)
predicted gene 12021 		ENSMUST00000121061 (Gm12021-001) 18508037-18509940 processed_pseudogene
ENSMUSG00000085453 (Gm12018)
predicted gene 12018 		ENSMUST00000150694 (Gm12018-001) 18095986-18103384 lincRNA
ENSMUSG00000085675 (Gm12022)
predicted gene 12022 		ENSMUST00000143311 (Gm12022-001) 18467479-18493255 lincRNA
ENSMUSG00000085806 (Gm12023)
predicted gene 12023 		ENSMUST00000145182 (Gm12023-001) 18595248-18710222 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000805_0001ENSG00000223859ENST00000427579ENSG00000224071ENST00000455096ENSG00000230355ENST00000451383ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_000805_0002ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081101ENSMUST00000118819ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000082852ENSMUST00000121061ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000085675ENSMUST00000143311ENSMUSG00000085806ENSMUST00000145182
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000805_0001ENSG00000223859ENST00000427579ENSG00000224071ENST00000455096ENSG00000230355ENST00000451383ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_000805_0002ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081101ENSMUST00000118819ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000082852ENSMUST00000121061ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000085675ENSMUST00000143311ENSMUSG00000085806ENSMUST00000145182
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000223859 ENST00000427579 N/A N/A N/A 0.040±0.00 N/A 0.034±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224071 ENST00000455096 N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A 0.056±0.00 N/A N/A N/A N/A N/A
ENSG00000230355 ENST00000451383 0.330±0.00 1.119±0.00 N/A 0.194±0.00 1.321±0.00 0.175±0.00 0.329±0.00 0.187±0.00 0.165±0.00 0.195±0.00 N/A 0.365±0.00 N/A N/A
ENSG00000230525 ENST00000411701 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A 0.374±0.00 N/A 0.150±0.00 N/A 0.099±0.03
ENST00000426260 N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A 0.125±0.12 N/A 0.216±0.00
ENSG00000232688 ENST00000444266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.526±0.00
ENSG00000235885 ENST00000445514 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A
ENST00000450294 N/A 0.115±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENST00000452716 N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593336 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENST00000594329 0.014±0.00 0.134±0.00 N/A 0.076±0.00 0.074±0.00 0.217±0.00 0.148±0.00 0.089±0.00 0.078±0.00 0.192±0.00 0.130±0.00 0.016±0.00 N/A 0.080±0.00
ENST00000598583 0.146±0.00 0.056±0.00 N/A 0.039±0.00 N/A 0.061±0.00 N/A 0.073±0.00 N/A 0.145±0.00 N/A N/A 0.090±0.00 0.051±0.00
ENST00000618608 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A 0.024±0.00 0.044±0.00
ENSG00000236605 ENST00000450944 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A 0.074±0.00
ENSG00000236780 ENST00000414404 N/A N/A 0.380±0.00 0.108±0.00 0.337±0.22 1.312±0.47 N/A N/A N/A 0.257±0.00 N/A 0.203±0.00 0.067±0.01 0.131±0.00
ENST00000433133 N/A N/A 0.074±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.021±0.00 N/A 0.060±0.05 N/A 0.004±0.00
ENST00000447453 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000080826 ENSMUST00000121258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00
ENSMUSG00000081101 ENSMUST00000118819 N/A N/A N/A N/A 0.019±0.00 N/A N/A 0.027±0.01 N/A N/A N/A 0.142±0.05 N/A 0.042±0.00
ENSMUSG00000081302 ENSMUST00000119030 N/A N/A 0.003±0.00 0.011±0.00 N/A N/A N/A N/A 0.025±0.01 N/A N/A 0.012±0.00 0.014±0.01 0.622±0.98
ENSMUSG00000082852 ENSMUST00000121061 0.014±0.00 0.033±0.00 0.034±0.01 N/A N/A 0.030±0.00 0.012±0.00 0.014±0.00 0.005±0.00 0.029±0.01 N/A 0.182±0.13 N/A 0.002±0.00
ENSMUSG00000085453 ENSMUST00000150694 0.017±0.00 N/A 0.002±0.00 0.013±0.00 N/A N/A 0.008±0.00 0.036±0.00 N/A N/A N/A 0.011±0.00 0.009±0.00 0.319±0.16
ENSMUSG00000085675 ENSMUST00000143311 0.485±0.20 0.231±0.03 0.111±0.00 N/A N/A N/A N/A 0.042±0.00 N/A 0.151±0.06 N/A 0.405±0.29 0.045±0.00 N/A
ENSMUSG00000085806 ENSMUST00000145182 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A 0.096±0.00 N/A N/A

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