C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000455096 AC009474.1-001 ENSG00000224071 9606 - 2:66820684-66822570 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverENST00000455096
Transcript ID Colon Liver
ENST00000455096 0.239±0.00 0.056±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983
CIL_0007XO CIL_0007XO_0001 VISTA 2:66524969-67125769
CIL_000805 CIL_000805_0001 VISTA 2:66754125-67355408

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111186 Dnmt3a-201 protein_coding Mus_musculus 0 1018
ENSMUST00000172689 Dnmt3a-005 protein_coding Mus_musculus 0 1018
ENSMUST00000174483 Dnmt3a-004 nonsense_mediated_decay Mus_musculus 0 1018
ENSMUST00000174817 Dnmt3a-006 protein_coding Mus_musculus 0 1018
ENSMUST00000020991 Dnmt3a-001 protein_coding Mus_musculus 0 1018
ENSMUST00000174733 Dnmt3a-015 nonsense_mediated_decay Mus_musculus 9.80909e-45 185

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