C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000846_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs313 VISTA 9606 9:78955707-79557309
GeneTranscriptPositionBiotype
ENSG00000186940 (CHCHD2P9)
coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 9 		ENST00000461726 (CHCHD2P9-001) 79391304-79391759 processed_pseudogene
ENSG00000226234 (KRT18P24)
keratin 18 pseudogene 24 		ENST00000344739 (KRT18P24-001) 79036413-79037568 processed_pseudogene
ENSG00000233086 (RP11-375O18.2)
 ENST00000413352 (RP11-375O18.2-002) 79516787-79532342 lincRNA
ENST00000424980 (RP11-375O18.2-001) 79505804-79532342 lincRNA
ENST00000608561 (RP11-375O18.2-003) 79517953-79532321 lincRNA
ENSG00000260995 (RP11-165H23.1)
 ENST00000566873 (RP11-165H23.1-001) 79135422-79145674 lincRNA
CIL_000846_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs313 VISTA 10090 19:14590554-15192150
GeneTranscriptPositionBiotype
ENSMUSG00000024642 (Tle4)
transducin-like enhancer of split 4, homolog of Drosophila E(spl) 		ENSMUST00000052011 (Tle4-201) 14448072-14597983 protein_coding
ENSMUST00000167776 (Tle4-202) 14448150-14598051 protein_coding
ENSMUSG00000063586 (Gm5513)
predicted pseudogene 5513 		ENSMUST00000072982 (Gm5513-201) 14959549-14960766 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000846_0001ENSG00000186940ENST00000461726ENSG00000226234ENST00000344739ENSG00000233086ENST00000413352ENST00000424980ENST00000608561ENSG00000260995ENST00000566873CIL_000846_0002ENSMUSG00000024642ENSMUST00000052011ENSMUST00000167776ENSMUSG00000063586ENSMUST00000072982
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000846_0001ENSG00000186940ENST00000461726ENSG00000226234ENST00000344739ENSG00000233086ENST00000413352ENST00000424980ENST00000608561ENSG00000260995ENST00000566873CIL_000846_0002ENSMUSG00000024642ENSMUST00000052011ENSMUST00000167776ENSMUSG00000063586ENSMUST00000072982
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186940 ENST00000461726 0.059±0.00 N/A N/A 0.080±0.00 N/A 0.128±0.00 0.062±0.00 0.210±0.00 0.061±0.00 0.068±0.00 0.172±0.00 N/A N/A N/A
ENSG00000226234 ENST00000344739 0.015±0.00 N/A N/A N/A N/A N/A N/A 0.018±0.00 0.015±0.00 N/A N/A N/A N/A 0.015±0.00
ENSG00000233086 ENST00000413352 0.017±0.00 0.017±0.00 N/A N/A 0.031±0.00 N/A N/A N/A 0.067±0.00 N/A 0.015±0.00 0.026±0.02 0.032±0.01 0.286±0.08
ENST00000424980 N/A N/A N/A N/A N/A N/A 0.705±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000608561 0.014±0.00 0.041±0.00 N/A 0.084±0.00 0.013±0.00 0.097±0.00 0.037±0.00 0.066±0.00 N/A N/A 0.012±0.00 0.036±0.00 N/A 0.884±0.00
ENSG00000260995 ENST00000566873 N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.566±0.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024642 ENSMUST00000052011 3.554±0.98 3.515±1.12 2.721±0.65 7.101±0.89 5.906±2.60 18.679±0.73 2.669±0.57 5.795±0.34 2.767±0.94 9.154±1.19 2.801±0.76 4.671±2.25 2.210±0.86 1.595±0.60
ENSMUST00000167776 N/A 4.823±0.00 0.772±0.23 3.489±2.07 N/A N/A 0.323±0.00 N/A 0.571±0.19 N/A 0.897±0.40 3.117±0.00 0.971±0.61 N/A
ENSMUSG00000063586 ENSMUST00000072982 0.039±0.00 N/A 0.011±0.01 0.007±0.00 0.136±0.00 N/A N/A 0.033±0.00 0.035±0.03 N/A 0.032±0.00 0.068±0.02 0.057±0.03 N/A

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