C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L29 pseudogene 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000425197 RPL29P19-001 ENSG00000224594 9606 + 8:48384590-48385049 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425197
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425197 0.086±0.00 1.260±0.00 0.155±0.00 0.050±0.00 0.184±0.00 0.042±0.00 0.638±0.00 0.291±0.00 0.095±0.00 0.450±0.00 0.370±0.28 1.065±0.03 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000860 CIL_000860_0001 VISTA 8:48079293-48680744
CIL_0008K9 CIL_0008K9_0001 VISTA 8:48128034-48729628
CIL_000861 CIL_000861_0001 VISTA 8:48255663-48856793
CIL_0008T2 CIL_0008T2_0001 VISTA 8:48279548-48880849
CIL_000923 CIL_000923_0001 VISTA 8:48281590-48883174

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000121617 Gm12340-001 unprocessed_pseudogene Mus_musculus 0 231
ENSMUST00000176181 Gm20702-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000161849 Rpl29-ps1-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000118671 Gm3267-001 processed_pseudogene Mus_musculus 4e-24 115
ENSMUST00000120590 Gm13740-001 processed_pseudogene Mus_musculus 4e-24 115

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