C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2 variant 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115777 Ube2v2-001 ENSMUSG00000022674 10090 - 16:15552677-15594524 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115777 1.636±0.63 1.781±0.52 4.115±0.69 6.544±3.64 1.425±0.67 1.357±0.39 1.071±0.21 1.636±0.36 3.072±1.22 2.538±0.44 1.224±0.20 2.274±1.00 1.255±1.02 1.305±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000860 CIL_000860_0002 VISTA 16:14994470-15596046
CIL_000462 CIL_000462_0002 CGP 16:15552677-15637400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0016881 IEA acid-amino acid ligase activity
GO:0042275 IGI error-free postreplication DNA repair

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340309 UBE2V1-003 protein_coding Homo_sapiens 0 390
ENST00000341698 TMEM189-UBE2V1-001 protein_coding Homo_sapiens 0 398
ENST00000371674 UBE2V1-004 protein_coding Homo_sapiens 0 388
ENST00000371677 UBE2V1-002 protein_coding Homo_sapiens 0 390
ENST00000396059 UBE2V1-010 processed_transcript Homo_sapiens 0 226
ENST00000397758 UBE2V1P2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000415862 UBE2V1-001 protein_coding Homo_sapiens 0 226
ENST00000420027 UBE2V1-201 protein_coding Homo_sapiens 0 222
ENST00000432266 UBE2V1-016 processed_transcript Homo_sapiens 0 285
ENST00000433562 UBE2V2P3-001 processed_pseudogene Homo_sapiens 0 442
ENST00000467839 UBE2V1-020 retained_intron Homo_sapiens 0 292
ENST00000472923 UBE2V1-015 processed_transcript Homo_sapiens 0 291
ENST00000483534 UBE2V1-007 nonsense_mediated_decay Homo_sapiens 0 224
ENST00000486653 UBE2V1-017 processed_transcript Homo_sapiens 0 377
ENST00000490555 UBE2V1-012 retained_intron Homo_sapiens 8.99998e-41 171
ENST00000492371 UBE2V1-013 processed_transcript Homo_sapiens 0 226
ENST00000493090 UBE2V1-019 retained_intron Homo_sapiens 2e-28 130
ENST00000517630 UBE2V2-006 protein_coding Homo_sapiens 0 780
ENST00000518360 UBE2V2-008 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000520595 UBE2V2-010 nonsense_mediated_decay Homo_sapiens 0 534
ENST00000520809 UBE2V2-002 protein_coding Homo_sapiens 0 1391
ENST00000521346 UBE2V2-007 protein_coding Homo_sapiens 0 1256
ENST00000521628 UBE2V2-003 retained_intron Homo_sapiens 0 852
ENST00000523111 UBE2V2-001 protein_coding Homo_sapiens 0 1478
ENST00000523432 UBE2V2-009 protein_coding Homo_sapiens 0 959
ENST00000557021 UBE2V1-202 protein_coding Homo_sapiens 0 387
ENST00000617119 UBE2V1-203 protein_coding Homo_sapiens 0 387
ENST00000625172 UBE2V1-204 protein_coding Homo_sapiens 0 390

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