C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00087B_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm366 VISTA 9606 13:40179165-40780133
GeneTranscriptPositionBiotype
ENSG00000102738 (MRPS31)
mitochondrial ribosomal protein S31 		ENST00000323563 (MRPS31-001) 40729135-40771173 protein_coding
ENST00000435009 (MRPS31-002) 40759002-40770943 processed_transcript
ENST00000461675 (MRPS31-003) 40729374-40752407 processed_transcript
ENST00000498078 (MRPS31-004) 40729296-40749613 processed_transcript
ENSG00000150907 (FOXO1)
forkhead box O1 		ENST00000379561 (FOXO1-001) 40555667-40666597 protein_coding
ENST00000473775 (FOXO1-002) 40560759-40562764 processed_transcript
ENSG00000215483 (LINC00598)
long intergenic non-protein coding RNA 598 		ENST00000400430 (LINC00598-001) 40450994-40481006 lincRNA
ENST00000400431 (LINC00598-002) 40452657-40460409 lincRNA
ENST00000542632 (LINC00598-201) 40450936-40470249 lincRNA
ENST00000615137 (LINC00598-005) 40458903-40535807 lincRNA
ENST00000616706 (LINC00598-003) 40450934-40481006 lincRNA
ENSG00000229456 (RLIMP1)
ring finger protein, LIM domain interacting pseudogene 1 		ENST00000339626 (RLIMP1-001) 40618738-40621348 processed_pseudogene
ENSG00000230058 (RP11-172E9.2)
 ENST00000400432 (RP11-172E9.2-001) 40343957-40350303 lincRNA
ENSG00000230710 (LINC00332)
long intergenic non-protein coding RNA 332 		ENST00000455241 (LINC00332-001) 40181809-40189028 lincRNA
ENSG00000271429 (RPL17P51)
ribosomal protein L17 pseudogene 51 		ENST00000605218 (RPL17P51-001) 40224625-40224862 processed_pseudogene
ENSG00000275149 (RP11-427J23.1)
 ENST00000615947 (RP11-427J23.1-001) 40079106-40273509 lincRNA
ENSG00000277794 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000614020 (Metazoa_SRP.1-452) 40730981-40731253 misc_RNA
ENSG00000278772 (LINC00548)
long intergenic non-protein coding RNA 548 		ENST00000617777 (LINC00548-001) 40194509-40220502 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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CIL_00087B_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm366 VISTA 10090 3:52101126-52702130
GeneTranscriptPositionBiotype
ENSMUSG00000044167 (Foxo1)
forkhead box O1 		ENSMUST00000053764 (Foxo1-001) 52268337-52350109 protein_coding
ENSMUSG00000061143 (Maml3)
mastermind like 3 (Drosophila) 		ENSMUST00000118075 (Maml3-002) 51689437-51796535 protein_coding
ENSMUST00000121440 (Maml3-001) 51687611-52104891 protein_coding
ENSMUSG00000070490 (Gm10293)
predicted pseudogene 10293 		ENSMUST00000076317 (Gm10293-001) 52612835-52613836 processed_pseudogene
ENSMUSG00000092405 (Gm20402)
predicted gene 20402 		ENSMUST00000174738 (Gm20402-001) 52268435-52269435 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00087B_0001ENSG00000102738ENST00000323563ENST00000435009ENST00000461675ENST00000498078ENSG00000150907ENST00000379561ENST00000473775ENSG00000215483ENST00000400430ENST00000400431ENST00000542632ENST00000615137ENST00000616706ENSG00000229456ENST00000339626ENSG00000230058ENST00000400432ENSG00000230710ENST00000455241ENSG00000271429ENST00000605218ENSG00000275149ENST00000615947ENSG00000277794ENST00000614020ENSG00000278772ENST00000617777CIL_00087B_0002ENSMUSG00000044167ENSMUST00000053764ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000070490ENSMUST00000076317ENSMUSG00000092405ENSMUST00000174738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00087B_0001ENSG00000102738ENST00000323563ENST00000435009ENST00000461675ENSG00000150907ENST00000379561ENSG00000215483ENST00000400430ENST00000542632ENST00000615137ENST00000616706ENSG00000229456ENST00000339626ENSG00000230058ENST00000400432ENSG00000230710ENST00000455241ENSG00000271429ENST00000605218ENSG00000275149ENST00000615947ENSG00000277794ENST00000614020ENSG00000278772ENST00000617777CIL_00087B_0002ENSMUSG00000044167ENSMUST00000053764ENSMUSG00000061143ENSMUST00000118075ENSMUST00000121440ENSMUSG00000070490ENSMUST00000076317ENSMUSG00000092405ENSMUST00000174738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102738 ENST00000323563 2.652±0.00 2.585±0.00 2.293±0.00 4.560±0.65 1.379±0.20 3.276±0.82 2.661±1.03 4.901±1.14 3.012±0.78 2.031±0.00 1.814±0.38 7.662±3.23 4.447±0.99 7.120±3.16
ENST00000435009 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.833±0.00 N/A N/A N/A N/A
ENST00000461675 N/A N/A N/A N/A N/A N/A N/A 5.562±0.00 N/A 5.230±0.00 N/A N/A N/A N/A
ENST00000498078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000150907 ENST00000379561 20.722±0.00 8.028±0.00 3.509±0.00 3.886±2.44 10.059±6.02 4.524±3.78 3.532±1.81 4.801±2.28 3.083±2.33 7.395±1.61 26.698±21.74 11.324±6.87 4.740±0.92 5.384±2.65
ENST00000473775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000215483 ENST00000400430 N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00
ENST00000400431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542632 N/A N/A N/A 0.034±0.00 N/A 0.110±0.00 N/A 0.023±0.00 0.006±0.00 N/A N/A 0.236±0.00 0.073±0.00 N/A
ENST00000615137 N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A 0.075±0.00 N/A N/A N/A N/A
ENST00000616706 N/A 0.172±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A 0.290±0.19
ENSG00000229456 ENST00000339626 N/A 0.265±0.00 N/A 0.063±0.05 0.062±0.00 0.302±0.00 0.057±0.02 1.292±0.00 0.031±0.00 0.480±0.45 0.194±0.09 0.068±0.06 0.011±0.00 0.020±0.01
ENSG00000230058 ENST00000400432 1.361±0.00 0.028±0.00 N/A 0.027±0.00 2.449±0.00 0.665±0.00 0.050±0.00 0.276±0.00 0.116±0.00 0.605±0.00 N/A 0.460±0.55 0.109±0.00 0.551±0.53
ENSG00000230710 ENST00000455241 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A 0.667±0.00 N/A 0.089±0.00 0.292±0.00 0.053±0.00 0.305±0.06
ENSG00000271429 ENST00000605218 N/A 0.062±0.00 N/A N/A 0.121±0.00 0.057±0.00 0.053±0.00 0.060±0.00 1.724±1.46 N/A 0.052±0.00 0.343±0.00 N/A 0.054±0.00
ENSG00000275149 ENST00000615947 0.685±0.00 0.164±0.00 0.037±0.00 0.152±0.09 0.528±0.26 0.528±0.00 0.104±0.06 0.060±0.04 0.152±0.13 0.156±0.00 0.165±0.00 0.064±0.04 0.046±0.02 0.187±0.07
ENSG00000277794 ENST00000614020 N/A N/A N/A N/A 1.679±0.00 N/A N/A N/A 0.187±0.00 1.353±0.00 0.375±0.00 1.630±1.06 N/A 0.688±0.53
ENSG00000278772 ENST00000617777 0.036±0.00 0.004±0.00 0.078±0.00 N/A 0.049±0.03 0.149±0.00 0.049±0.04 0.072±0.00 0.121±0.10 N/A N/A 0.118±0.00 0.018±0.00 0.011±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044167 ENSMUST00000053764 19.123±0.39 8.586±1.20 7.533±1.01 2.656±0.34 17.862±1.90 6.345±0.56 5.828±0.41 9.913±0.56 3.322±1.34 12.891±0.62 3.105±0.74 51.075±10.28 3.086±1.77 1.375±0.60
ENSMUSG00000061143 ENSMUST00000118075 N/A 1.429±0.12 N/A N/A N/A 2.221±0.37 N/A N/A 0.118±0.03 N/A N/A 2.676±0.80 17.597±2.92 0.538±0.00
ENSMUST00000121440 1.083±0.52 3.603±0.24 1.999±0.40 2.913±1.72 1.684±0.79 4.146±0.45 0.858±0.16 1.565±0.25 0.439±0.24 5.590±0.64 0.468±0.12 3.176±0.63 8.698±4.31 0.258±0.11
ENSMUSG00000070490 ENSMUST00000076317 1.129±0.42 0.193±0.12 0.309±0.08 0.572±0.48 0.792±0.52 0.250±0.12 0.828±0.32 0.484±0.23 0.427±0.73 0.159±0.13 0.972±0.14 0.268±0.18 0.289±0.16 0.071±0.04
ENSMUSG00000092405 ENSMUST00000174738 35.057±3.05 46.156±11.16 N/A N/A 58.713±15.13 16.644±2.39 N/A 15.571±2.41 7.112±1.18 27.512±9.94 N/A 179.530±17.57 N/A 1.982±0.08

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