C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 10293
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076317 Gm10293-001 ENSMUSG00000070490 10090 + 3:52612835-52613836 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076317
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076317 1.129±0.42 0.193±0.12 0.309±0.08 0.572±0.48 0.792±0.52 0.250±0.12 0.828±0.32 0.484±0.23 0.427±0.73 0.159±0.13 0.972±0.14 0.268±0.18 0.289±0.16 0.071±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087B CIL_00087B_0002 VISTA 3:52101126-52702130

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 466
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1238
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 966
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1212
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1238
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1238
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 544
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 990
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 931
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 1035
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 922
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 318
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 636
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 898
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 843
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 1116
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 955
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 752
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 658
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 894
ENST00000433910 GAPDHP75-001 processed_pseudogene Homo_sapiens 0 507
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 854
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 684
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 673
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 9e-34 145
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 584
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1162
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 859
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 623
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 966
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 966
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 636
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 867
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 909
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 931
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 1013
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 693
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 294
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 315
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 924
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 968
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 904
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 592
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1092

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