C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 11676
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120443 Gm11676-001 ENSMUSG00000082448 10090 - 11:111612817-111613306 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000120443
Transcript ID Testis
ENSMUST00000120443 0.111±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072G CIL_00072G_0002 CGP 11:111066164-112787760
CIL_00088A CIL_00088A_0002 VISTA 11:111263100-111864002
CIL_0008WI CIL_0008WI_0002 VISTA 11:111268522-111869439
CIL_0008WH CIL_0008WH_0002 VISTA 11:111327111-111928109
CIL_000970 CIL_000970_0002 VISTA 11:111347327-111948996
CIL_000971 CIL_000971_0002 VISTA 11:111366051-111967477
CIL_000972 CIL_000972_0002 VISTA 11:111481021-112081954
CIL_0007VG CIL_0007VG_0002 VISTA 11:111527905-112129224

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000421928 RPL29P28-001 processed_pseudogene Homo_sapiens 1e-23 113
ENST00000449887 RP11-166O4.4-001 unprocessed_pseudogene Homo_sapiens 2e-21 106
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 3e-35 152
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 8e-21 104
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0.000000004 66

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