C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008AR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs71 VISTA 9606 16:51337270-51938128
GeneTranscriptPositionBiotype
ENSG00000224578 (HNRNPA1P48)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 		ENST00000562726 (HNRNPA1P48-002) 51645756-51647132 processed_transcript
ENST00000565308 (HNRNPA1P48-001) 51645820-51646780 transcribed_processed_pseudogene
ENSG00000260057 (RP11-7O14.1)
 ENST00000563603 (RP11-7O14.1-002) 51771564-51773173 lincRNA
ENST00000569993 (RP11-7O14.1-001) 51762519-51772646 lincRNA
ENSG00000260850 (RP11-437L7.1)
 ENST00000569751 (RP11-437L7.1-001) 51354456-51356532 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008AR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs71 VISTA 10090 8:89164933-89765803
GeneTranscriptPositionBiotype
ENSMUSG00000064758 (Gm26331)
predicted gene, 26331 		ENSMUST00000082824 (Gm26331-201) 89589435-89589541 snRNA
ENSMUSG00000069962 (Gm5356)
predicted pseudogene 5356 		ENSMUST00000093326 (Gm5356-001) 89186946-89187560 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AR_0001ENSG00000224578ENST00000562726ENST00000565308ENSG00000260057ENST00000563603ENST00000569993ENSG00000260850ENST00000569751CIL_0008AR_0002ENSMUSG00000064758ENSMUST00000082824ENSMUSG00000069962ENSMUST00000093326
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008AR_0001ENSG00000224578ENST00000562726ENST00000565308ENSG00000260057ENST00000563603ENST00000569993ENSG00000260850ENST00000569751CIL_0008AR_0002ENSMUSG00000064758ENSMUST00000082824ENSMUSG00000069962ENSMUST00000093326
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000224578 ENST00000562726 3.390±0.00 4.623±0.00 N/A 0.528±0.47 1.029±0.88 1.913±1.79 1.411±0.00 1.226±1.13 0.530±0.51 2.823±0.00 2.455±0.00 3.657±2.10 2.863±1.56 2.649±0.76
ENST00000565308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A
ENSG00000260057 ENST00000563603 0.013±0.00 N/A 0.261±0.00 0.023±0.00 0.041±0.00 0.035±0.00 N/A 0.381±0.00 N/A 0.077±0.00 N/A 0.161±0.00 N/A N/A
ENST00000569993 N/A N/A N/A 0.035±0.00 N/A 0.102±0.00 N/A 0.371±0.00 0.051±0.00 0.654±0.00 N/A 0.308±0.00 N/A 0.026±0.00
ENSG00000260850 ENST00000569751 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000064758 ENSMUST00000082824 N/A N/A N/A 65.219±62.78 N/A N/A N/A N/A 70.634±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000069962 ENSMUST00000093326 0.095±0.03 N/A 0.016±0.00 0.018±0.01 0.181±0.00 N/A N/A 0.054±0.00 0.039±0.03 N/A 0.111±0.02 N/A 0.010±0.00 N/A

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