| Transcript ID | Ovary |
|---|---|
| ENST00000565308 | 1.208±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | heterogeneous nuclear ribonucleoprotein A1 pseudogene 48 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000565308  |
HNRNPA1P48-001 |
ENSG00000224578 |
9606 | + |
16:51645820-51646780  |
transcribed_processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007ON | CIL_0007ON_0001 | UCNEbase | 16:50459337-51906374 |
| CIL_0008AN | CIL_0008AN_0001 | VISTA | 16:51055384-51656808 |
| CIL_0007YA | CIL_0007YA_0001 | VISTA | 16:51157888-51759114 |
| CIL_0008AM | CIL_0008AM_0001 | VISTA | 16:51226285-51827014 |
| CIL_0008AP | CIL_0008AP_0001 | VISTA | 16:51242814-51844190 |
| CIL_0008AO | CIL_0008AO_0001 | VISTA | 16:51323899-51924805 |
| CIL_0008AR | CIL_0008AR_0001 | VISTA | 16:51337270-51938128 |
| CIL_0008AQ | CIL_0008AQ_0001 | VISTA | 16:51398237-51999703 |
| CIL_0008J6 | CIL_0008J6_0001 | VISTA | 16:51423280-52024332 |
| CIL_0008J7 | CIL_0008J7_0001 | VISTA | 16:51452269-52053458 |
| CIL_0008J5 | CIL_0008J5_0001 | VISTA | 16:51483394-52084521 |
| CIL_00085D | CIL_00085D_0001 | VISTA | 16:51519686-52121020 |
| CIL_0008J2 | CIL_0008J2_0001 | VISTA | 16:51624376-52225776 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000087351
|
Hnrnpa1-202 | protein_coding | Mus_musculus | 0 | 1371 |
|
ENSMUST00000168019
|
Gm10052-001 | processed_pseudogene | Mus_musculus | 0 | 1369 |
|
ENSMUST00000117081
|
Gm5643-001 | processed_pseudogene | Mus_musculus | 0 | 1321 |
|
ENSMUST00000022493
|
Gm5803-001 | processed_pseudogene | Mus_musculus | 0 | 1282 |
|
ENSMUST00000129154
|
Hnrnpa1l2-ps-001 | processed_pseudogene | Mus_musculus | 0 | 1267 |
|
ENSMUST00000181363
|
Gm8652-001 | processed_pseudogene | Mus_musculus | 0 | 1254 |
|
ENSMUST00000040649
|
AC165425.1-201 | pseudogene | Mus_musculus | 0 | 1090 |
|
ENSMUST00000050143
|
Gm7729-001 | unprocessed_pseudogene | Mus_musculus | 0 | 1064 |
|
ENSMUST00000036004
|
Hnrnpa1-201 | protein_coding | Mus_musculus | 0 | 1064 |
|
ENSMUST00000118970
|
Gm16216-001 | processed_pseudogene | Mus_musculus | 0 | 1031 |
|
ENSMUST00000119097
|
Gm13418-001 | processed_pseudogene | Mus_musculus | 0 | 1026 |
|
ENSMUST00000184038
|
Gm5269-001 | translated_processed_pseudogene | Mus_musculus | 0 | 902 |
|
ENSMUST00000178732
|
RP24-383H12.1-001 | processed_pseudogene | Mus_musculus | 0 | 832 |
|
ENSMUST00000122346
|
Gm11860-001 | processed_pseudogene | Mus_musculus | 0 | 771 |
|
ENSMUST00000120205
|
Gm13297-001 | processed_pseudogene | Mus_musculus | 0 | 754 |
|
ENSMUST00000122005
|
Gm12382-001 | processed_pseudogene | Mus_musculus | 0 | 616 |
|
ENSMUST00000189260
|
RP23-389M9.4-001 | processed_pseudogene | Mus_musculus | 0 | 586 |
|
ENSMUST00000119387
|
Gm12458-001 | processed_pseudogene | Mus_musculus | 0 | 534 |
|
ENSMUST00000183590
|
Gm5269-002 | protein_coding | Mus_musculus | 6e-40 | 169 |
