C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008FF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs109 VISTA 9606 16:73018413-73620686
GeneTranscriptPositionBiotype
ENSG00000140836 (ZFHX3)
zinc finger homeobox 3 		ENST00000268489 (ZFHX3-001) 72782885-73048375 protein_coding
ENST00000397992 (ZFHX3-002) 72782885-73059698 protein_coding
ENST00000558842 (ZFHX3-004) 73058881-73059222 processed_transcript
ENST00000563625 (ZFHX3-003) 72829509-72889834 retained_intron
ENSG00000197445 (C16orf47)
chromosome 16 open reading frame 47 		ENST00000358463 (C16orf47-001) 73126637-73144447 lincRNA
ENSG00000258582 (RP11-44L9.1)
 ENST00000557393 (RP11-44L9.1-001) 73483317-73487744 lincRNA
ENSG00000258779 (RP11-140I24.1)
 ENST00000554640 (RP11-140I24.1-002) 73387053-73402480 lincRNA
ENST00000555721 (RP11-140I24.1-001) 73386805-73421393 lincRNA
ENST00000561875 (RP11-140I24.1-004) 73387063-73389241 lincRNA
ENST00000562661 (RP11-140I24.1-003) 73387053-73421210 lincRNA
ENSG00000259971 (RP11-44L9.3)
 ENST00000564291 (RP11-44L9.3-001) 73511176-73511654 lincRNA
ENSG00000260687 (RP11-44L9.2)
 ENST00000562748 (RP11-44L9.2-001) 73499309-73499763 lincRNA
ENSG00000260848 (CTD-2009A10.1)
 ENST00000567227 (CTD-2009A10.1-001) 73543941-73558522 lincRNA
ENSG00000260880 (HCCAT5)
hepatocellular carcinoma associated transcript 5 (non-protein coding) 		ENST00000569990 (HCCAT5-001) 73092349-73093774 lincRNA
ENSG00000261227 (AC140912.1)
 ENST00000561802 (AC140912.1-001) 73232762-73233970 lincRNA
ENST00000577171 (AC140912.1-002) 73232055-73233108 lincRNA
ENSG00000271009 (RP11-346C20.3)
 ENST00000604855 (RP11-346C20.3-001) 73060470-73062316 lincRNA
ENSG00000272250 (RP11-346C20.4)
 ENST00000606272 (RP11-346C20.4-001) 73060245-73060759 lincRNA
CIL_0008FF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs109 VISTA 10090 8:108166096-108768543
GeneTranscriptPositionBiotype
ENSMUSG00000038872 (Zfhx3)
zinc finger homeobox 3 		ENSMUST00000043896 (Zfhx3-001) 108714644-108961630 protein_coding
ENSMUST00000188994 (Zfhx3-002) 108703100-108800270 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FF_0001ENSG00000140836ENST00000268489ENST00000397992ENST00000558842ENST00000563625ENSG00000197445ENST00000358463ENSG00000258582ENST00000557393ENSG00000258779ENST00000554640ENST00000555721ENST00000561875ENST00000562661ENSG00000259971ENST00000564291ENSG00000260687ENST00000562748ENSG00000260848ENST00000567227ENSG00000260880ENST00000569990ENSG00000261227ENST00000561802ENST00000577171ENSG00000271009ENST00000604855ENSG00000272250ENST00000606272CIL_0008FF_0002ENSMUSG00000038872ENSMUST00000043896ENSMUST00000188994
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FF_0001ENSG00000140836ENST00000268489ENST00000397992ENSG00000197445ENST00000358463ENSG00000258582ENST00000557393ENSG00000258779ENST00000554640ENST00000555721ENST00000561875ENST00000562661ENSG00000259971ENST00000564291ENSG00000260687ENST00000562748ENSG00000260848ENST00000567227ENSG00000260880ENST00000569990ENSG00000261227ENST00000561802ENST00000577171ENSG00000271009ENST00000604855ENSG00000272250ENST00000606272CIL_0008FF_0002ENSMUSG00000038872ENSMUST00000043896
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140836 ENST00000268489 2.846±0.00 1.535±0.00 0.574±0.00 0.467±0.19 2.931±0.00 1.923±0.62 0.941±0.58 1.264±0.27 0.396±0.00 1.136±0.04 2.810±1.01 1.031±0.48 1.095±0.49 1.211±0.73
ENST00000397992 1.459±0.00 0.340±0.00 0.520±0.00 0.356±0.24 1.332±0.00 1.257±0.47 0.573±0.39 1.088±0.00 0.557±0.07 1.489±0.41 4.108±0.00 0.990±0.64 2.001±1.82 0.878±0.00
ENST00000558842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197445 ENST00000358463 0.127±0.00 0.105±0.00 N/A 0.123±0.08 0.082±0.00 0.087±0.00 0.036±0.00 0.094±0.00 0.068±0.00 0.082±0.00 N/A N/A 0.082±0.01 0.150±0.00
ENSG00000258582 ENST00000557393 N/A 0.686±0.00 N/A 0.343±0.00 0.411±0.00 0.212±0.00 0.396±0.00 0.375±0.00 0.102±0.00 0.026±0.00 0.075±0.00 0.117±0.00 N/A 0.131±0.00
ENSG00000258779 ENST00000554640 0.036±0.00 0.131±0.00 N/A 0.038±0.00 0.020±0.00 0.046±0.00 0.023±0.01 0.100±0.00 0.026±0.00 0.017±0.00 N/A 0.038±0.00 N/A N/A
ENST00000555721 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.677±0.03
ENST00000561875 N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.00 N/A N/A N/A N/A N/A
ENST00000562661 N/A N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A N/A 0.248±0.00 N/A N/A 2.590±0.00
ENSG00000259971 ENST00000564291 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.660±0.00 N/A N/A N/A N/A
ENSG00000260687 ENST00000562748 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00
ENSG00000260848 ENST00000567227 N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A 0.043±0.00
ENSG00000260880 ENST00000569990 N/A 0.076±0.00 N/A 0.044±0.00 N/A 0.037±0.00 N/A N/A N/A 0.256±0.00 0.167±0.00 N/A 0.035±0.00 0.045±0.01
ENSG00000261227 ENST00000561802 N/A N/A N/A N/A N/A 0.296±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577171 N/A 0.034±0.00 N/A 0.377±0.07 N/A N/A N/A N/A N/A N/A N/A 0.065±0.04 0.107±0.00 N/A
ENSG00000271009 ENST00000604855 0.199±0.00 0.051±0.00 0.204±0.00 0.077±0.01 0.084±0.00 0.174±0.06 0.040±0.01 0.096±0.00 0.475±0.40 0.156±0.14 0.197±0.00 0.162±0.04 0.116±0.06 0.178±0.02
ENSG00000272250 ENST00000606272 0.363±0.00 N/A N/A 0.127±0.05 N/A 1.196±0.00 0.121±0.07 0.301±0.00 N/A 0.824±0.00 0.523±0.00 0.587±0.07 0.341±0.06 0.140±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038872 ENSMUST00000043896 1.185±0.24 4.956±0.44 1.515±0.52 5.854±5.84 1.095±0.52 2.505±0.48 0.586±0.11 0.755±0.10 0.465±0.33 3.606±0.21 0.486±0.08 1.461±0.60 0.880±0.31 0.587±0.34
ENSMUST00000188994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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