C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008K9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm383 VISTA 9606 8:48128034-48729628
GeneTranscriptPositionBiotype
ENSG00000034239 (EFCAB1)
EF-hand calcium binding domain 1 		ENST00000262103 (EFCAB1-001) 48723408-48735232 protein_coding
ENST00000433756 (EFCAB1-201) 48714915-48735311 protein_coding
ENST00000519425 (EFCAB1-004) 48724737-48730125 retained_intron
ENST00000521002 (EFCAB1-002) 48710789-48735234 processed_transcript
ENST00000521701 (EFCAB1-007) 48716224-48735301 nonsense_mediated_decay
ENST00000521721 (EFCAB1-009) 48729764-48735311 processed_transcript
ENST00000522254 (EFCAB1-006) 48724410-48730610 protein_coding
ENST00000523008 (EFCAB1-010) 48713634-48729789 protein_coding
ENST00000523092 (EFCAB1-008) 48724691-48735268 protein_coding
ENSG00000224594 (RPL29P19)
ribosomal protein L29 pseudogene 19 		ENST00000425197 (RPL29P19-001) 48384590-48385049 processed_pseudogene
ENSG00000233858 (AC026904.1)
 ENST00000430626 (AC026904.1-001) 48590401-48594621 lincRNA
ENSG00000253140 (RP11-567J20.3)
 ENST00000521359 (RP11-567J20.3-001) 48515852-48517089 lincRNA
ENSG00000253455 (RP11-770E5.3)
 ENST00000521660 (RP11-770E5.3-001) 48620465-48623895 lincRNA
ENSG00000253608 (RP11-770E5.1)
 ENST00000522575 (RP11-770E5.1-001) 48551567-48698510 antisense
ENSG00000253654 (CTD-2210A23.1)
 ENST00000520250 (CTD-2210A23.1-001) 48294026-48294694 processed_pseudogene
ENSG00000253688 (RP11-567J20.2)
 ENST00000524011 (RP11-567J20.2-001) 48552015-48556441 lincRNA
ENSG00000253702 (RP11-567J20.1)
 ENST00000523038 (RP11-567J20.1-001) 48597458-48621018 lincRNA
ENSG00000253843 (RP11-769N21.2)
 ENST00000519711 (RP11-769N21.2-001) 48193850-48194627 processed_pseudogene
ENSG00000253892 (RP11-770E5.2)
 ENST00000518620 (RP11-770E5.2-001) 48657260-48658894 lincRNA
ENSG00000279881 (RP11-513O13.1)
 ENST00000622926 (RP11-513O13.1-001) 48428143-48431041 TEC

Homo sapiens Ensembl (GRCh38)

Genome
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Genes
Structures from Ensembl
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Structures from Ensembl
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CIL_0008K9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm383 VISTA 10090 16:14894413-15496116
GeneTranscriptPositionBiotype
ENSMUSG00000068617 (Efcab1)
EF hand calcium binding domain 1 		ENSMUST00000090277 (Efcab1-201) 14906637-14925879 protein_coding
ENSMUSG00000094472 (Gm21897)
predicted gene, 21897 		ENSMUST00000178312 (Gm21897-201) 15317458-15318957 protein_coding

Mus musculus Ensembl (GRCm38)

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Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008K9_0001ENSG00000034239ENST00000262103ENST00000433756ENST00000519425ENST00000521002ENST00000521701ENST00000521721ENST00000522254ENST00000523008ENST00000523092ENSG00000224594ENST00000425197ENSG00000233858ENST00000430626ENSG00000253140ENST00000521359ENSG00000253455ENST00000521660ENSG00000253608ENST00000522575ENSG00000253654ENST00000520250ENSG00000253688ENST00000524011ENSG00000253702ENST00000523038ENSG00000253843ENST00000519711ENSG00000253892ENST00000518620ENSG00000279881ENST00000622926CIL_0008K9_0002ENSMUSG00000068617ENSMUST00000090277ENSMUSG00000094472ENSMUST00000178312
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008K9_0001ENSG00000034239ENST00000262103ENST00000433756ENST00000519425ENST00000521002ENST00000521701ENST00000521721ENST00000522254ENST00000523092ENSG00000224594ENST00000425197ENSG00000233858ENST00000430626ENSG00000253140ENST00000521359ENSG00000253455ENST00000521660ENSG00000253608ENST00000522575ENSG00000253654ENST00000520250ENSG00000253688ENST00000524011ENSG00000253702ENST00000523038ENSG00000253843ENST00000519711ENSG00000253892ENST00000518620ENSG00000279881ENST00000622926CIL_0008K9_0002ENSMUSG00000068617ENSMUST00000090277ENSMUSG00000094472ENSMUST00000178312
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000034239 ENST00000262103 N/A 0.138±0.00 N/A 0.099±0.00 0.084±0.00 0.092±0.00 N/A 0.010±0.00 0.084±0.07 1.873±1.24 N/A 1.275±1.50 0.070±0.03 3.202±0.58
ENST00000433756 N/A 0.026±0.00 N/A 0.515±0.00 0.179±0.00 0.063±0.05 N/A N/A 0.015±0.00 N/A N/A 0.909±0.89 0.036±0.00 N/A
ENST00000519425 N/A N/A N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A N/A 0.870±0.00 N/A N/A
ENST00000521002 N/A N/A N/A N/A 0.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521701 N/A 0.077±0.00 N/A N/A N/A N/A 0.033±0.00 N/A 0.131±0.00 N/A 0.048±0.00 N/A N/A 5.271±0.00
ENST00000521721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A
ENST00000522254 N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A 0.109±0.00 1.344±0.00 N/A N/A 0.043±0.00 N/A
ENST00000523008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523092 N/A N/A N/A 0.452±0.00 N/A 0.129±0.00 0.192±0.00 N/A 0.905±0.00 N/A N/A N/A 0.179±0.01 10.878±2.72
ENSG00000224594 ENST00000425197 0.086±0.00 1.260±0.00 N/A 0.155±0.00 0.050±0.00 0.184±0.00 0.042±0.00 0.638±0.00 0.291±0.00 0.095±0.00 0.450±0.00 0.370±0.28 1.065±0.03 0.042±0.00
ENSG00000233858 ENST00000430626 0.017±0.00 0.034±0.00 0.121±0.00 N/A 0.092±0.07 0.079±0.07 0.048±0.04 0.067±0.05 0.181±0.00 N/A N/A 0.074±0.03 0.036±0.02 0.051±0.00
ENSG00000253140 ENST00000521359 N/A 0.867±0.00 N/A 0.052±0.00 N/A 0.046±0.00 N/A N/A N/A 0.321±0.28 N/A N/A N/A 0.023±0.00
ENSG00000253455 ENST00000521660 N/A 0.118±0.00 N/A N/A 0.060±0.00 0.277±0.00 N/A N/A N/A N/A N/A 0.386±0.00 0.273±0.03 0.679±0.28
ENSG00000253608 ENST00000522575 0.012±0.00 0.158±0.00 N/A 0.013±0.00 0.022±0.00 0.021±0.02 0.011±0.00 0.085±0.00 0.021±0.00 N/A N/A 0.071±0.04 0.067±0.05 0.156±0.05
ENSG00000253654 ENST00000520250 N/A N/A N/A 0.015±0.00 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253688 ENST00000524011 0.044±0.00 0.487±0.00 N/A 0.047±0.00 0.065±0.00 N/A 0.148±0.00 0.084±0.01 0.255±0.18 0.119±0.00 N/A 0.327±0.27 0.316±0.11 0.161±0.02
ENSG00000253702 ENST00000523038 N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A 0.144±0.01
ENSG00000253843 ENST00000519711 N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000253892 ENST00000518620 N/A 0.070±0.00 N/A N/A N/A 0.206±0.00 N/A N/A N/A N/A N/A N/A N/A 0.484±0.18
ENSG00000279881 ENST00000622926 0.091±0.00 0.309±0.00 N/A 0.007±0.00 0.108±0.00 0.016±0.00 0.033±0.00 0.024±0.00 N/A 0.085±0.05 N/A 0.079±0.05 0.043±0.02 0.032±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000068617 ENSMUST00000090277 0.373±0.22 0.628±0.27 1.630±0.05 1.844±1.01 0.138±0.05 0.139±0.07 0.116±0.08 0.064±0.04 0.059±0.02 2.499±0.31 0.017±0.01 2.957±1.00 0.123±0.12 1.104±0.58
ENSMUSG00000094472 ENSMUST00000178312 5.135±1.39 4.118±0.74 13.650±3.18 46.822±24.29 4.964±0.52 2.736±1.13 6.689±0.95 4.991±1.05 8.028±2.24 8.861±3.13 1.916±0.26 7.728±5.73 16.438±3.88 36.848±8.76

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