C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008R4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs669 VISTA 9606 8:91512531-92114390
GeneTranscriptPositionBiotype
ENSG00000253901 (RP11-122C21.1)
 ENST00000518416 (RP11-122C21.1-002) 91564980-91907453 lincRNA
ENST00000521199 (RP11-122C21.1-001) 91542924-91907619 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008R4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs669 VISTA 10090 4:13724600-14326426
GeneTranscriptPositionBiotype
ENSMUSG00000006586 (Runx1t1)
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 		ENSMUST00000006761 (Runx1t1-001) 13743436-13893649 protein_coding
ENSMUST00000098256 (Runx1t1-004) 13784782-13891117 protein_coding
ENSMUST00000098257 (Runx1t1-003) 13771377-13890323 protein_coding
ENSMUST00000105566 (Runx1t1-201) 13751297-13893628 protein_coding
ENSMUST00000139736 (Runx1t1-005) 13889220-13889962 processed_transcript
ENSMUST00000150583 (Runx1t1-002) 13751297-13843027 processed_transcript
ENSMUSG00000082128 (Gm11824)
predicted gene 11824 		ENSMUST00000120191 (Gm11824-001) 14170066-14170911 processed_pseudogene
ENSMUSG00000086068 (1700120G11Rik)
RIKEN cDNA 1700120G11 gene 		ENSMUST00000150273 (1700120G11Rik-001) 14219496-14237450 lincRNA
ENSMUSG00000086927 (Gm11823)
predicted gene 11823 		ENSMUST00000130582 (Gm11823-001) 13919954-13995193 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008R4_0001ENSG00000253901ENST00000518416ENST00000521199CIL_0008R4_0002ENSMUSG00000006586ENSMUST00000006761ENSMUST00000098256ENSMUST00000098257ENSMUST00000105566ENSMUST00000139736ENSMUST00000150583ENSMUSG00000082128ENSMUST00000120191ENSMUSG00000086068ENSMUST00000150273ENSMUSG00000086927ENSMUST00000130582
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008R4_0001ENSG00000253901ENST00000518416ENST00000521199CIL_0008R4_0002ENSMUSG00000006586ENSMUST00000006761ENSMUST00000098256ENSMUST00000098257ENSMUST00000105566ENSMUST00000139736ENSMUST00000150583ENSMUSG00000082128ENSMUST00000120191ENSMUSG00000086068ENSMUST00000150273ENSMUSG00000086927ENSMUST00000130582
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000253901 ENST00000518416 N/A 0.130±0.00 N/A 0.032±0.00 0.092±0.00 N/A N/A 0.089±0.00 0.079±0.00 N/A N/A N/A N/A N/A
ENST00000521199 N/A 0.036±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006586 ENSMUST00000006761 1.162±0.73 0.164±0.02 1.513±0.59 10.052±7.27 0.271±0.05 0.450±0.12 0.210±0.07 0.098±0.04 0.899±0.83 0.793±0.30 0.207±0.05 0.495±0.20 0.477±0.36 N/A
ENSMUST00000098256 1.438±0.19 0.179±0.07 N/A 2.984±0.00 0.826±0.42 0.220±0.06 0.409±0.11 0.290±0.06 1.118±0.69 0.649±0.24 N/A 1.362±0.44 0.257±0.04 0.368±0.00
ENSMUST00000098257 0.762±0.47 0.136±0.07 N/A 7.020±0.00 0.656±0.04 0.498±0.21 0.280±0.04 0.223±0.05 0.064±0.02 0.680±0.10 N/A 1.055±0.82 0.348±0.11 2.710±0.63
ENSMUST00000105566 N/A N/A N/A N/A N/A 0.292±0.00 N/A N/A 0.455±0.14 N/A N/A N/A N/A 0.470±0.26
ENSMUST00000139736 N/A 0.888±0.31 N/A N/A 4.591±1.46 2.517±0.90 N/A N/A 0.140±0.00 3.677±0.39 N/A 5.967±1.78 N/A N/A
ENSMUST00000150583 N/A N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000082128 ENSMUST00000120191 2.486±0.39 N/A 0.047±0.02 1.017±0.97 1.850±0.42 0.924±0.62 0.493±0.19 0.633±0.43 0.779±1.89 0.683±0.15 0.098±0.02 4.801±2.62 0.020±0.00 0.237±0.05
ENSMUSG00000086068 ENSMUST00000150273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.339±1.82
ENSMUSG00000086927 ENSMUST00000130582 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.002±0.00 N/A

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