C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S3a pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488297 RPS3AP22-001 ENSG00000240083 9606 + 5:88381957-88382725 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000488297
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000488297 0.043±0.00 0.072±0.03 0.109±0.00 0.080±0.06 0.035±0.02 0.261±0.24 0.053±0.03 0.051±0.00 0.032±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S7 CIL_0008S7_0001 VISTA 5:88096337-88697448
CIL_0005KE CIL_0005KE_0002 CGP 5:88189633-88904105

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029722 Rps3a1-001 protein_coding Mus_musculus 0 628
ENSMUST00000119822 Gm13408-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000121859 Gm13935-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000186012 RP24-117M7.2-001 processed_pseudogene Mus_musculus 0 272
ENSMUST00000185666 Khdrbs2-004 protein_coding Mus_musculus 5e-30 135

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