C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: S100 calcium binding protein A11 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000467589 S100A11P2-001 ENSG00000236592 9606 + 7:35169224-35169535 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENST00000467589
Transcript ID Brain Heart Kidney
ENST00000467589 0.235±0.00 0.816±0.00 0.335±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SV CIL_0008SV_0001 VISTA 7:34897251-35498313
CIL_0008SU CIL_0008SU_0001 VISTA 7:34914906-35515639
CIL_00091I CIL_00091I_0001 VISTA 7:34928902-35529768
CIL_00091J CIL_00091J_0001 VISTA 7:34935659-35536509
CIL_00091K CIL_00091K_0001 VISTA 7:34980510-35581474
CIL_00091G CIL_00091G_0001 VISTA 7:34991564-35592509
CIL_0008SW CIL_0008SW_0001 VISTA 7:35002867-35603499
CIL_00091H CIL_00091H_0001 VISTA 7:35019394-35620244
CIL_0008SR CIL_0008SR_0001 VISTA 7:35048704-35649425
CIL_0009CB CIL_0009CB_0001 VISTA 7:35073081-35676867
CIL_00084T CIL_00084T_0001 VISTA 7:35073115-35676739
CIL_00091N CIL_00091N_0001 VISTA 7:35115190-35716608
CIL_0008SX CIL_0008SX_0001 VISTA 7:35118941-35719912
CIL_00091M CIL_00091M_0001 VISTA 7:35165574-35766732

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181735 Gm5068-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000118445 Gm13640-001 processed_pseudogene Mus_musculus 1e-37 159

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