C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008U2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1689 VISTA 9606 11:86595852-87198957
GeneTranscriptPositionBiotype
ENSG00000150687 (PRSS23)
protease, serine, 23 		ENST00000280258 (PRSS23-001) 86800240-86811233 protein_coding
ENST00000527521 (PRSS23-005) 86791059-86808106 protein_coding
ENST00000528769 (PRSS23-007) 86940786-86951407 processed_transcript
ENST00000531475 (PRSS23-003) 86800544-86932893 processed_transcript
ENST00000531521 (PRSS23-006) 86940786-86951736 processed_transcript
ENST00000532234 (PRSS23-002) 86800521-86952788 nonsense_mediated_decay
ENST00000532572 (PRSS23-009) 86823396-86937819 retained_intron
ENST00000533880 (PRSS23-008) 86800544-86932934 processed_transcript
ENST00000533902 (PRSS23-004) 86800521-86952910 protein_coding
ENSG00000166575 (TMEM135)
transmembrane protein 135 		ENST00000305494 (TMEM135-001) 87038007-87322350 protein_coding
ENST00000340353 (TMEM135-003) 87037844-87323758 protein_coding
ENST00000525018 (TMEM135-006) 87037985-87277448 protein_coding
ENST00000526733 (TMEM135-010) 87037921-87157408 protein_coding
ENST00000528861 (TMEM135-012) 87319067-87322035 retained_intron
ENST00000529023 (TMEM135-005) 87037892-87157885 retained_intron
ENST00000531643 (TMEM135-007) 87318135-87322350 retained_intron
ENST00000531800 (TMEM135-011) 87071517-87157408 retained_intron
ENST00000532959 (TMEM135-004) 87037950-87321359 protein_coding
ENSG00000174804 (FZD4)
frizzled class receptor 4 		ENST00000531380 (FZD4-001) 86945679-86955391 protein_coding
ENSG00000197882 (OR7E13P)
olfactory receptor, family 7, subfamily E, member 13 pseudogene 		ENST00000526052 (OR7E13P-001) 86832540-86833449 unprocessed_pseudogene
ENSG00000246523 (RP11-736K20.6)
 ENST00000499504 (RP11-736K20.6-002) 86955619-87000959 lincRNA
ENST00000531827 (RP11-736K20.6-001) 86956091-87000490 lincRNA
ENSG00000254731 (CTD-2005H7.1)
 ENST00000526206 (CTD-2005H7.1-001) 86703099-86714092 lincRNA
ENSG00000254733 (RP11-317J19.1)
 ENST00000524610 (RP11-317J19.1-001) 86431590-86622867 antisense
ENSG00000254748 (HNRNPCP8)
heterogeneous nuclear ribonucleoprotein C pseudogene 8 		ENST00000528764 (HNRNPCP8-001) 87024583-87025777 unprocessed_pseudogene
ENSG00000254843 (RP11-648O15.1)
 ENST00000527404 (RP11-648O15.1-001) 87094734-87096585 processed_pseudogene
ENSG00000255203 (OR7E2P)
olfactory receptor, family 7, subfamily E, member 2 pseudogene 		ENST00000533071 (OR7E2P-001) 86857059-86857947 unprocessed_pseudogene
ENSG00000255250 (CTD-2005H7.2)
 ENST00000532979 (CTD-2005H7.2-001) 86727355-86765265 lincRNA
ENSG00000255471 (RP11-736K20.5)
 ENST00000528660 (RP11-736K20.5-001) 86892214-86922104 antisense
ENST00000533672 (RP11-736K20.5-002) 86921922-86925037 antisense
ENSG00000269895 (AP000654.4)
 ENST00000602510 (AP000654.4-001) 86833068-86837615 lincRNA
ENSG00000271318 (AP000654.5)
 ENST00000605633 (AP000654.5-001) 86821143-86821728 processed_pseudogene
ENSG00000277121 (AP002967.1)
 ENST00000617414 (AP002967.1-201) 87089014-87089120 miRNA
ENSG00000279492 (RP11-736K20.2)
 ENST00000623451 (RP11-736K20.2-001) 86999876-87000961 TEC
ENSG00000279836 (RP11-648O15.2)
 ENST00000624203 (RP11-648O15.2-001) 87121058-87121596 TEC
ENSG00000280339 (RP11-736K20.4)
 ENST00000624364 (RP11-736K20.4-001) 86908990-86912238 TEC
CIL_0008U2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1689 VISTA 10090 7:89154519-89757634
GeneTranscriptPositionBiotype
ENSMUSG00000030621 (Me3)
malic enzyme 3, NADP(+)-dependent, mitochondrial 		ENSMUST00000032853 (Me3-006) 89829282-89851962 protein_coding
ENSMUST00000032856 (Me3-001) 89632703-89854359 protein_coding
ENSMUST00000159167 (Me3-002) 89632886-89849152 retained_intron
ENSMUST00000159491 (Me3-005) 89736731-89818433 processed_transcript
ENSMUST00000159504 (Me3-004) 89632392-89810197 retained_intron
ENSMUST00000160995 (Me3-007) 89739917-89818931 processed_transcript
ENSMUST00000162145 (Me3-003) 89632534-89643673 processed_transcript
ENSMUSG00000030623 (Prss23os)
protease, serine 23, opposite strand 		ENSMUST00000032858 (Prss23os-001) 89510023-89510491 antisense
ENSMUST00000179361 (Prss23os-002) 89510007-89511368 antisense
ENSMUSG00000039405 (Prss23)
protease, serine 23 		ENSMUST00000041761 (Prss23-201) 89507785-89517586 protein_coding
ENSMUSG00000039428 (Tmem135)
transmembrane protein 135 		ENSMUST00000041968 (Tmem135-001) 89139723-89338787 protein_coding
ENSMUST00000117852 (Tmem135-002) 89146073-89338760 protein_coding
ENSMUST00000124477 (Tmem135-008) 89156448-89404222 processed_transcript
ENSMUST00000136267 (Tmem135-006) 89154127-89159617 processed_transcript
ENSMUST00000137723 (Tmem135-003) 89305467-89338737 protein_coding
ENSMUST00000139320 (Tmem135-005) 89158978-89298290 processed_transcript
ENSMUST00000154434 (Tmem135-004) 89304487-89338691 retained_intron
ENSMUST00000156153 (Tmem135-007) 89141856-89154300 retained_intron
ENSMUSG00000049791 (Fzd4)
frizzled homolog 4 (Drosophila) 		ENSMUST00000058755 (Fzd4-201) 89404366-89410110 protein_coding
ENSMUSG00000098019 (Gm2546)
predicted gene 2546 		ENSMUST00000182630 (Gm2546-001) 89607706-89608696 processed_pseudogene
ENSMUSG00000101924 (RP24-72H18.1)
predicted gene 28748 		ENSMUST00000187465 (RP24-72H18.1-001) 89337179-89368419 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008U2_0001ENSG00000150687ENST00000280258ENST00000527521ENST00000528769ENST00000531475ENST00000531521ENST00000532234ENST00000532572ENST00000533880ENST00000533902ENSG00000166575ENST00000305494ENST00000340353ENST00000525018ENST00000526733ENST00000528861ENST00000529023ENST00000531643ENST00000531800ENST00000532959ENSG00000174804ENST00000531380ENSG00000197882ENST00000526052ENSG00000246523ENST00000499504ENST00000531827ENSG00000254731ENST00000526206ENSG00000254733ENST00000524610ENSG00000254748ENST00000528764ENSG00000254843ENST00000527404ENSG00000255203ENST00000533071ENSG00000255250ENST00000532979ENSG00000255471ENST00000528660ENST00000533672ENSG00000269895ENST00000602510ENSG00000271318ENST00000605633ENSG00000277121ENST00000617414ENSG00000279492ENST00000623451ENSG00000279836ENST00000624203ENSG00000280339ENST00000624364CIL_0008U2_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008U2_0001ENSG00000150687ENST00000280258ENSG00000166575ENST00000305494ENST00000340353ENST00000525018ENST00000526733ENST00000529023ENST00000531643ENST00000531800ENST00000532959ENSG00000174804ENST00000531380ENSG00000197882ENST00000526052ENSG00000246523ENST00000499504ENST00000531827ENSG00000254731ENST00000526206ENSG00000254733ENST00000524610ENSG00000254748ENST00000528764ENSG00000254843ENST00000527404ENSG00000255203ENST00000533071ENSG00000255250ENST00000532979ENSG00000255471ENST00000528660ENST00000533672ENSG00000269895ENST00000602510ENSG00000271318ENST00000605633ENSG00000277121ENST00000617414ENSG00000279492ENST00000623451ENSG00000279836ENST00000624203ENSG00000280339ENST00000624364CIL_0008U2_0002ENSMUSG00000030621ENSMUST00000032853ENSMUST00000032856ENSMUST00000159167ENSMUST00000159504ENSMUST00000160995ENSMUST00000162145ENSMUSG00000030623ENSMUST00000032858ENSMUST00000179361ENSMUSG00000039405ENSMUST00000041761ENSMUSG00000039428ENSMUST00000041968ENSMUST00000124477ENSMUST00000136267ENSMUST00000137723ENSMUSG00000049791ENSMUST00000058755ENSMUSG00000098019ENSMUST00000182630ENSMUSG00000101924ENSMUST00000187465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150687 ENST00000280258 26.323±0.00 19.771±0.00 N/A 3.034±2.24 10.805±0.00 19.046±15.35 2.964±0.00 14.502±0.00 13.805±5.62 54.830±0.00 1.695±0.00 14.374±7.98 27.909±2.37 14.567±3.79
ENST00000527521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532572 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166575 ENST00000305494 2.195±0.00 N/A 0.899±0.00 2.514±0.00 2.906±0.30 4.403±0.00 0.456±0.00 2.116±0.00 2.189±0.00 4.549±0.00 N/A 1.184±0.00 0.667±0.19 N/A
ENST00000340353 N/A 0.945±0.00 0.647±0.00 1.511±0.12 1.537±0.15 1.105±0.00 N/A 1.633±0.56 0.414±0.00 1.346±0.00 1.103±0.84 0.435±0.15 0.958±0.55 1.909±0.00
ENST00000525018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.075±0.00 N/A N/A N/A
ENST00000526733 N/A N/A 7.875±0.00 N/A N/A N/A N/A N/A N/A N/A 8.518±0.00 N/A N/A N/A
ENST00000528861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529023 N/A N/A N/A N/A 3.231±0.00 2.802±0.00 0.946±0.00 N/A N/A N/A N/A 1.663±0.00 N/A N/A
ENST00000531643 N/A N/A 1.176±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.451±0.00 N/A N/A
ENST00000531800 N/A N/A N/A N/A 35.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532959 N/A N/A N/A 2.557±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000174804 ENST00000531380 52.456±0.00 12.548±0.00 8.207±0.00 2.208±0.86 41.742±32.77 8.044±2.51 7.690±3.21 8.537±2.56 8.335±3.99 11.995±3.27 4.516±0.82 6.399±3.14 5.630±0.28 4.997±0.89
ENSG00000197882 ENST00000526052 0.367±0.00 N/A 1.284±0.00 0.361±0.00 2.384±2.11 0.565±0.54 0.071±0.01 N/A 7.162±0.00 1.341±0.00 N/A 0.532±0.48 0.080±0.00 N/A
ENSG00000246523 ENST00000499504 0.106±0.00 N/A 0.407±0.00 N/A N/A 0.093±0.06 0.259±0.00 N/A 0.162±0.11 0.693±0.00 N/A 0.187±0.09 N/A 0.335±0.13
ENST00000531827 0.379±0.00 N/A N/A 0.344±0.00 0.379±0.00 0.189±0.06 0.641±0.40 0.208±0.12 0.202±0.04 0.352±0.00 1.023±0.00 0.398±0.12 0.123±0.05 0.901±0.00
ENSG00000254731 ENST00000526206 0.098±0.00 0.172±0.00 N/A 0.035±0.00 0.103±0.00 0.449±0.00 N/A N/A N/A N/A 0.145±0.00 0.364±0.00 0.144±0.00 0.061±0.00
ENSG00000254733 ENST00000524610 N/A 0.166±0.00 N/A N/A N/A 0.935±0.00 N/A N/A 0.215±0.00 N/A N/A N/A 0.411±0.19 1.327±1.06
ENSG00000254748 ENST00000528764 0.025±0.00 N/A N/A 0.013±0.00 0.077±0.00 0.393±0.00 0.048±0.00 0.039±0.00 N/A N/A N/A 0.050±0.02 N/A 0.077±0.00
ENSG00000254843 ENST00000527404 0.138±0.00 N/A 0.085±0.00 0.101±0.00 0.092±0.00 0.075±0.00 N/A 0.144±0.00 N/A N/A N/A 0.048±0.03 N/A 0.107±0.00
ENSG00000255203 ENST00000533071 N/A 0.016±0.00 0.504±0.00 0.056±0.04 0.985±0.84 0.523±0.36 0.090±0.08 N/A 3.097±0.00 0.078±0.00 N/A 0.187±0.05 0.084±0.00 0.271±0.00
ENSG00000255250 ENST00000532979 0.098±0.00 0.179±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A 0.054±0.00 0.051±0.00 0.273±0.00
ENSG00000255471 ENST00000528660 N/A 0.362±0.00 N/A 0.563±0.00 N/A N/A 1.458±0.00 0.652±0.00 0.018±0.00 N/A 0.945±0.08 0.413±0.39 0.448±0.02 N/A
ENST00000533672 N/A N/A N/A N/A N/A N/A N/A N/A 0.308±0.00 N/A N/A N/A N/A N/A
ENSG00000269895 ENST00000602510 0.357±0.00 0.531±0.00 0.165±0.00 0.100±0.07 0.174±0.00 0.149±0.13 0.039±0.00 0.249±0.00 0.071±0.00 0.562±0.31 0.155±0.00 0.341±0.27 0.029±0.01 0.359±0.20
ENSG00000271318 ENST00000605633 0.033±0.00 N/A N/A 0.234±0.04 N/A N/A N/A N/A 0.706±0.00 N/A N/A 0.096±0.05 N/A 0.060±0.02
ENSG00000277121 ENST00000617414 0.310±0.00 0.896±0.00 N/A 0.290±0.00 0.137±0.00 0.130±0.00 N/A N/A 0.132±0.00 N/A N/A N/A N/A N/A
ENSG00000279492 ENST00000623451 N/A 0.147±0.00 N/A 0.176±0.03 0.586±0.00 N/A 0.126±0.00 0.075±0.00 N/A 0.158±0.00 0.233±0.00 0.178±0.05 N/A 0.491±0.00
ENSG00000279836 ENST00000624203 N/A 0.069±0.00 0.275±0.00 N/A 0.408±0.36 N/A 0.483±0.00 N/A 1.784±0.00 1.192±0.00 N/A 0.030±0.00 0.039±0.00 0.057±0.02
ENSG00000280339 ENST00000624364 8.065±0.00 0.691±0.00 1.090±0.00 0.504±0.22 8.729±7.38 1.379±0.57 0.874±0.18 0.899±0.53 1.100±0.98 1.687±0.03 0.699±0.31 2.032±1.39 0.196±0.07 1.458±0.47
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030621 ENSMUST00000032853 2.889±1.71 1.543±0.00 2.458±0.31 9.828±12.94 4.763±3.08 1.179±0.05 16.150±2.86 17.598±1.81 0.043±0.00 1.197±0.23 18.388±1.73 8.689±1.26 N/A 6.309±2.32
ENSMUST00000032856 N/A N/A 0.535±0.00 0.776±0.95 N/A 0.878±0.00 2.209±0.00 N/A N/A N/A N/A 0.737±0.00 N/A N/A
ENSMUST00000159167 1.078±0.61 0.662±0.00 1.092±0.00 3.117±4.09 4.323±0.00 0.475±0.00 N/A N/A 0.085±0.03 0.800±0.00 N/A 4.500±1.13 0.161±0.00 N/A
ENSMUST00000159491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159504 N/A N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A 0.946±0.00 N/A N/A
ENSMUST00000160995 N/A N/A N/A N/A N/A N/A N/A N/A 0.551±0.18 N/A N/A 15.401±0.00 N/A N/A
ENSMUST00000162145 3.016±2.65 N/A 0.481±0.00 0.282±0.00 1.310±0.32 1.965±1.11 N/A 4.725±0.69 0.756±0.61 1.614±0.25 N/A 3.532±0.33 0.415±0.20 0.930±0.34
ENSMUSG00000030623 ENSMUST00000032858 N/A N/A N/A 8.290±0.00 N/A N/A N/A N/A N/A N/A N/A 85.109±0.00 9.944±0.00 N/A
ENSMUST00000179361 66.865±33.15 12.269±0.00 N/A 2.377±0.71 43.449±2.15 16.184±2.17 3.541±1.01 22.942±6.72 1.665±0.47 26.373±9.53 15.061±3.66 43.498±23.57 4.649±4.09 16.513±7.85
ENSMUSG00000039405 ENSMUST00000041761 5.685±2.07 1.028±0.25 18.241±4.62 0.622±0.12 3.322±0.00 1.911±0.24 1.082±0.00 3.514±0.15 0.292±0.17 2.058±0.12 4.495±2.12 7.058±2.22 1.051±1.03 N/A
ENSMUSG00000039428 ENSMUST00000041968 24.938±14.94 52.438±3.17 2.733±0.17 5.544±2.09 20.465±5.93 10.623±1.67 5.393±2.47 16.732±5.88 8.144±4.72 10.154±1.69 1.364±0.20 19.937±5.35 3.352±0.93 2.215±0.27
ENSMUST00000117852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124477 N/A N/A N/A N/A N/A N/A N/A 16.409±1.42 N/A N/A N/A N/A N/A 2.167±0.05
ENSMUST00000136267 N/A N/A N/A 31.247±0.00 N/A N/A N/A N/A N/A N/A N/A 35.393±0.00 18.597±0.00 2.512±0.00
ENSMUST00000137723 60.304±46.35 100.362±21.12 N/A N/A 75.870±12.14 12.120±2.25 8.702±0.23 28.433±8.39 27.653±2.40 15.326±2.50 N/A 28.153±5.50 N/A N/A
ENSMUST00000139320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049791 ENSMUST00000058755 N/A 16.416±6.96 5.431±0.00 N/A 22.075±10.48 4.512±1.10 N/A N/A 3.078±1.50 12.924±2.43 N/A 14.357±2.13 1.785±1.62 0.425±0.24
ENSMUSG00000098019 ENSMUST00000182630 0.422±0.27 0.228±0.07 0.282±0.01 0.156±0.08 0.781±0.80 0.136±0.03 0.567±0.18 0.520±0.64 0.260±0.13 0.114±0.02 0.410±0.10 0.154±0.09 0.268±0.08 0.045±0.02
ENSMUSG00000101924 ENSMUST00000187465 0.078±0.00 N/A 0.027±0.02 0.013±0.00 0.093±0.04 0.094±0.00 N/A 0.040±0.00 0.028±0.03 0.055±0.00 0.042±0.00 0.062±0.00 0.016±0.00 N/A

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