C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008VD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs352 VISTA 9606 14:96996207-97597407
GeneTranscriptPositionBiotype
ENSG00000246084 (CTD-2506J14.1)
 ENST00000499910 (CTD-2506J14.1-001) 97458870-97464159 lincRNA
ENST00000554260 (CTD-2506J14.1-002) 97458831-97469385 lincRNA
ENST00000554862 (CTD-2506J14.1-003) 97458816-97581601 lincRNA
ENSG00000259110 (RP11-359N5.1)
 ENST00000554445 (RP11-359N5.1-001) 97154857-97158736 lincRNA
ENSG00000280070 (RP11-907D1.3)
 ENST00000623920 (RP11-907D1.3-001) 96992864-96996601 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0008VD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs352 VISTA 10090 12:106077315-106678522
GeneTranscriptPositionBiotype
ENSMUSG00000021115 (Vrk1)
vaccinia related kinase 1 		ENSMUST00000021539 (Vrk1-201) 106010263-106077410 protein_coding
ENSMUST00000072040 (Vrk1-202) 106010263-106077410 protein_coding
ENSMUST00000085026 (Vrk1-203) 106010263-106077410 protein_coding
ENSMUSG00000091442 (Gm17031)
predicted gene 17031 		ENSMUST00000016698 (Gm17031-001) 106508242-106509910 processed_pseudogene
ENSMUSG00000091583 (Gm17033)
predicted gene 17033 		ENSMUST00000146663 (Gm17033-001) 106558750-106574924 lincRNA
ENSMUSG00000091762 (Gm3191)
predicted gene 3191 		ENSMUST00000167139 (Gm3191-001) 106459150-106459495 processed_pseudogene
ENSMUSG00000092066 (1700121N20Rik)
RIKEN cDNA 1700121N20 gene 		ENSMUST00000167922 (1700121N20Rik-001) 106442653-106447666 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008VD_0001ENSG00000246084ENST00000499910ENST00000554260ENST00000554862ENSG00000259110ENST00000554445ENSG00000280070ENST00000623920CIL_0008VD_0002ENSMUSG00000021115ENSMUST00000021539ENSMUST00000072040ENSMUST00000085026ENSMUSG00000091442ENSMUST00000016698ENSMUSG00000091583ENSMUST00000146663ENSMUSG00000091762ENSMUST00000167139ENSMUSG00000092066ENSMUST00000167922
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008VD_0001ENSG00000246084ENST00000499910ENST00000554260ENST00000554862ENSG00000259110ENST00000554445ENSG00000280070ENST00000623920CIL_0008VD_0002ENSMUSG00000021115ENSMUST00000021539ENSMUST00000072040ENSMUST00000085026ENSMUSG00000091442ENSMUST00000016698ENSMUSG00000091583ENSMUST00000146663ENSMUSG00000091762ENSMUST00000167139ENSMUSG00000092066ENSMUST00000167922
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000246084 ENST00000499910 N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.091±0.00 0.032±0.00
ENST00000554260 N/A N/A N/A 0.027±0.00 0.187±0.00 N/A N/A 0.113±0.00 N/A N/A N/A N/A 0.152±0.00 0.066±0.00
ENST00000554862 N/A 0.149±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.093±0.05
ENSG00000259110 ENST00000554445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.145±0.11
ENSG00000280070 ENST00000623920 N/A 0.026±0.00 N/A 0.023±0.02 0.105±0.00 0.021±0.00 0.012±0.00 N/A 0.014±0.00 0.087±0.06 N/A 0.047±0.00 N/A 0.025±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021115 ENSMUST00000021539 N/A N/A N/A N/A 0.692±0.30 0.405±0.00 N/A 0.418±0.06 0.192±0.02 N/A 0.153±0.03 1.754±0.63 1.364±0.00 1.567±0.32
ENSMUST00000072040 1.392±0.94 1.250±0.26 1.278±0.25 2.788±1.61 1.232±0.56 1.483±0.24 0.499±0.13 0.718±0.34 3.370±2.48 1.860±0.84 0.335±0.09 2.321±1.08 3.625±1.99 N/A
ENSMUST00000085026 0.536±0.10 0.985±0.49 0.571±0.09 2.823±0.30 0.647±0.00 N/A 0.472±0.09 0.376±0.09 1.215±0.98 0.615±0.00 0.308±0.13 1.683±0.66 2.413±1.50 1.133±0.36
ENSMUSG00000091442 ENSMUST00000016698 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 N/A
ENSMUSG00000091583 ENSMUST00000146663 N/A N/A N/A 0.069±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.16
ENSMUSG00000091762 ENSMUST00000167139 N/A N/A N/A 0.153±0.11 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.794±2.27
ENSMUSG00000092066 ENSMUST00000167922 N/A N/A N/A 0.020±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 2.520±1.22

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