C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086635 Pitpnb-201 ENSMUSG00000050017 10090 + 5:111330763-111388359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086635
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086635 13.601±2.05 13.790±12.64 26.470±0.81 21.228±3.66 7.225±2.72 15.405±5.62 5.003±2.63 7.254±2.23 17.834±4.98 16.344±4.76 4.435±0.78 21.009±10.20 28.110±7.98 10.552±3.94

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W4 CIL_0007W4_0002 VISTA 5:110754482-111355796
CIL_0004YV CIL_0004YV_0002 CGP 5:110879803-111388359
CIL_0008Y6 CIL_0008Y6_0002 VISTA 5:110955885-111557844
CIL_0009D3 CIL_0009D3_0002 VISTA 5:111094040-111695157
CIL_0008RE CIL_0008RE_0002 VISTA 5:111235796-111837085
CIL_0008WL CIL_0008WL_0002 VISTA 5:111277305-111878296
CIL_00088U CIL_00088U_0002 VISTA 5:111301262-111902739
CIL_0004YU CIL_0004YU_0002 CGP 5:111330763-111457033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0005543 ISA phospholipid binding
GO:0005794 IEA Golgi apparatus
GO:0006810 IEA transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320996 PITPNB-002 protein_coding Homo_sapiens 0 1114
ENST00000335272 PITPNB-001 protein_coding Homo_sapiens 0 1267
ENST00000415296 PITPNB-003 protein_coding Homo_sapiens 0 785
ENST00000436663 PITPNB-006 protein_coding Homo_sapiens 0 676
ENST00000455418 PITPNB-201 protein_coding Homo_sapiens 0 1188
ENST00000460566 PITPNB-005 retained_intron Homo_sapiens 0 462
ENST00000477861 PITPNB-007 retained_intron Homo_sapiens 0 861
ENST00000493007 PITPNB-009 retained_intron Homo_sapiens 0 255

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