C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Z1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2419 VISTA 9606 7:82110305-82711792
GeneTranscriptPositionBiotype
ENSG00000153956 (CACNA2D1)
calcium channel, voltage-dependent, alpha 2/delta subunit 1 		ENST00000356253 (CACNA2D1-201) 81950102-82443715 protein_coding
ENST00000356860 (CACNA2D1-001) 81946444-82443798 protein_coding
ENST00000423588 (CACNA2D1-002) 82050336-82443716 protein_coding
ENST00000443883 (CACNA2D1-005) 81969881-82005790 protein_coding
ENST00000461275 (CACNA2D1-011) 82050935-82084836 processed_transcript
ENST00000464354 (CACNA2D1-004) 82005447-82033072 processed_transcript
ENST00000466806 (CACNA2D1-006) 82005331-82012251 retained_intron
ENST00000469297 (CACNA2D1-009) 81961894-81964282 retained_intron
ENST00000475237 (CACNA2D1-010) 82007662-82032901 retained_intron
ENST00000484706 (CACNA2D1-003) 82117044-82343236 processed_transcript
ENST00000486539 (CACNA2D1-008) 81967165-81971089 retained_intron
ENST00000492734 (CACNA2D1-007) 82012043-82038235 retained_intron
ENSG00000213530 (MTHFD2P5)
methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 5 		ENST00000320415 (MTHFD2P5-001) 82589848-82590691 processed_pseudogene
ENSG00000228711 (AC004006.2)
 ENST00000434994 (AC004006.2-001) 82657035-82657411 processed_pseudogene
CIL_0008Z1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2419 VISTA 10090 5:15666035-16267426
GeneTranscriptPositionBiotype
ENSMUSG00000040118 (Cacna2d1)
calcium channel, voltage-dependent, alpha2/delta subunit 1 		ENSMUST00000039370 (Cacna2d1-201) 15934691-16374511 protein_coding
ENSMUST00000078272 (Cacna2d1-202) 15934691-16374511 protein_coding
ENSMUST00000101581 (Cacna2d1-203) 15934691-16374511 protein_coding
ENSMUST00000115281 (Cacna2d1-204) 15934829-16370727 protein_coding
ENSMUST00000167946 (Cacna2d1-205) 15934691-16374511 protein_coding
ENSMUST00000180204 (Cacna2d1-206) 15934691-16374511 protein_coding
ENSMUSG00000073208 (Speer4c)
spermatogenesis associated glutamate (E)-rich protein 4c 		ENSMUST00000095005 (Speer4c-001) 15709501-15714236 protein_coding
ENSMUST00000179506 (Speer4c-201) 15711557-15714271 protein_coding
ENSMUSG00000089871 (Speer7-ps1)
spermatogenesis associated glutamate (E)-rich protein 7, pseudogene 1 		ENSMUST00000162113 (Speer7-ps1-001) 15680710-15714596 processed_transcript
ENSMUSG00000096936 (Gm3510)
predicted gene 3510 		ENSMUST00000180447 (Gm3510-201) 15923755-15933406 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z1_0001ENSG00000153956ENST00000356253ENST00000356860ENST00000423588ENST00000443883ENST00000461275ENST00000464354ENST00000466806ENST00000469297ENST00000475237ENST00000484706ENST00000486539ENST00000492734ENSG00000213530ENST00000320415ENSG00000228711ENST00000434994CIL_0008Z1_0002ENSMUSG00000040118ENSMUST00000039370ENSMUST00000078272ENSMUST00000101581ENSMUST00000115281ENSMUST00000167946ENSMUST00000180204ENSMUSG00000073208ENSMUST00000095005ENSMUST00000179506ENSMUSG00000089871ENSMUST00000162113ENSMUSG00000096936ENSMUST00000180447
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Z1_0001ENSG00000153956ENST00000356253ENST00000356860ENST00000423588ENST00000443883ENSG00000213530ENST00000320415ENSG00000228711ENST00000434994CIL_0008Z1_0002ENSMUSG00000040118ENSMUST00000039370ENSMUST00000078272ENSMUST00000101581ENSMUST00000115281ENSMUST00000180204ENSMUSG00000073208ENSMUST00000095005ENSMUST00000179506ENSMUSG00000089871ENSMUST00000162113ENSMUSG00000096936ENSMUST00000180447
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000153956 ENST00000356253 N/A N/A N/A 2.539±0.00 N/A N/A N/A N/A 1.823±0.00 N/A 10.408±0.00 N/A N/A N/A
ENST00000356860 1.290±0.00 N/A N/A 6.453±1.29 7.174±5.81 2.119±0.85 1.485±0.00 0.782±0.52 0.483±0.34 0.445±0.00 N/A 0.671±0.38 0.205±0.00 0.334±0.00
ENST00000423588 N/A N/A N/A N/A N/A N/A 4.622±0.00 N/A 7.873±0.00 N/A 16.667±0.00 N/A N/A N/A
ENST00000443883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A
ENST00000461275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213530 ENST00000320415 N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENSG00000228711 ENST00000434994 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.227±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040118 ENSMUST00000039370 N/A 2.718±0.00 N/A N/A 6.482±0.56 N/A N/A N/A N/A 1.163±0.00 40.372±6.22 N/A N/A N/A
ENSMUST00000078272 2.208±1.45 7.643±1.81 6.332±0.00 N/A 1.024±0.09 0.983±0.26 N/A 0.370±0.03 0.083±0.05 2.555±0.31 N/A 3.687±0.72 0.085±0.05 0.117±0.01
ENSMUST00000101581 N/A N/A N/A 15.970±2.43 0.688±0.00 0.674±0.20 2.028±0.00 0.704±0.00 0.008±0.00 N/A N/A N/A N/A N/A
ENSMUST00000115281 3.189±0.27 10.492±4.17 N/A 18.802±0.00 0.385±0.00 1.142±0.55 N/A N/A 0.052±0.03 0.748±0.00 N/A 3.325±0.99 0.157±0.08 0.719±0.25
ENSMUST00000167946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000180204 N/A 8.087±3.72 5.201±2.52 3.574±1.61 1.205±0.13 0.779±0.27 5.107±1.62 0.687±0.00 0.042±0.01 0.880±0.00 N/A 4.629±1.25 N/A N/A
ENSMUSG00000073208 ENSMUST00000095005 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A 0.849±0.26
ENSMUST00000179506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.625±1.66
ENSMUSG00000089871 ENSMUST00000162113 0.613±0.48 0.358±0.23 1.567±0.05 0.415±0.16 1.205±0.48 1.028±0.57 0.049±0.02 0.076±0.04 0.019±0.01 N/A N/A 8.336±4.88 0.401±0.21 2.475±0.36
ENSMUSG00000096936 ENSMUST00000180447 0.037±0.00 0.135±0.00 0.020±0.01 1.008±0.37 0.034±0.00 N/A 0.124±0.06 N/A 0.006±0.00 N/A 0.020±0.01 0.053±0.04 0.018±0.00 0.048±0.00

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