C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009BI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1187 VISTA 9606 5:50795065-51396423
GeneTranscriptPositionBiotype
ENSG00000016082 (ISL1)
ISL LIM homeobox 1 		ENST00000230658 (ISL1-001) 51383391-51394738 protein_coding
ENST00000505475 (ISL1-006) 51386204-51393567 processed_transcript
ENST00000511384 (ISL1-003) 51383672-51393610 protein_coding
ENSG00000151883 (PARP8)
poly (ADP-ribose) polymerase family, member 8 		ENST00000281631 (PARP8-001) 50666938-50846522 protein_coding
ENST00000502524 (PARP8-012) 50666374-50759690 protein_coding
ENST00000503046 (PARP8-026) 50666981-50760366 protein_coding
ENST00000503193 (PARP8-016) 50667004-50763261 nonsense_mediated_decay
ENST00000503561 (PARP8-006) 50667893-50842342 processed_transcript
ENST00000503665 (PARP8-019) 50666967-50745032 protein_coding
ENST00000503707 (PARP8-025) 50666967-50763242 nonsense_mediated_decay
ENST00000503750 (PARP8-201) 50667893-50842335 protein_coding
ENST00000503790 (PARP8-009) 50665899-50778126 processed_transcript
ENST00000503888 (PARP8-015) 50665973-50761902 nonsense_mediated_decay
ENST00000505180 (PARP8-010) 50667884-50761900 processed_transcript
ENST00000505554 (PARP8-007) 50667557-50843374 protein_coding
ENST00000505697 (PARP8-002) 50665899-50842068 protein_coding
ENST00000507812 (PARP8-008) 50665901-50761887 nonsense_mediated_decay
ENST00000510040 (PARP8-018) 50666819-50669517 retained_intron
ENST00000510303 (PARP8-014) 50665990-50761902 nonsense_mediated_decay
ENST00000511363 (PARP8-003) 50665899-50842342 processed_transcript
ENST00000513414 (PARP8-021) 50666761-50668128 processed_transcript
ENST00000513738 (PARP8-017) 50666967-50744828 protein_coding
ENST00000514067 (PARP8-004) 50666979-50842341 protein_coding
ENST00000514342 (PARP8-202) 50666938-50834022 protein_coding
ENST00000515166 (PARP8-005) 50667089-50842293 nonsense_mediated_decay
ENST00000515175 (PARP8-020) 50666688-50778114 protein_coding
ENSG00000240627 (CTD-2312P21.1)
 ENST00000468490 (CTD-2312P21.1-001) 51275253-51275734 processed_pseudogene
ENSG00000249405 (RP11-317O24.1)
 ENST00000512599 (RP11-317O24.1-001) 50858760-50860020 lincRNA
ENSG00000250360 (CTD-2089N3.1)
 ENST00000510349 (CTD-2089N3.1-001) 50965687-50967008 lincRNA
ENSG00000259663 (CTD-2314G24.2)
 ENST00000558403 (CTD-2314G24.2-002) 51378575-51379675 antisense
ENST00000559112 (CTD-2314G24.2-001) 51377068-51383332 antisense
ENST00000601500 (CTD-2314G24.2-003) 51372736-51379497 antisense
CIL_0009BI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1187 VISTA 10090 13:116275049-116876418
GeneTranscriptPositionBiotype
ENSMUSG00000021725 (Parp8)
poly (ADP-ribose) polymerase family, member 8 		ENSMUST00000022239 (Parp8-201) 116854824-117025516 protein_coding
ENSMUSG00000042258 (Isl1)
ISL1 transcription factor, LIM/homeodomain 		ENSMUST00000036060 (Isl1-001) 116298281-116309689 protein_coding
ENSMUST00000176044 (Isl1-002) 116299263-116309422 protein_coding
ENSMUST00000176444 (Isl1-005) 116299395-116303351 retained_intron
ENSMUST00000176812 (Isl1-004) 116303046-116306397 processed_transcript
ENSMUST00000177469 (Isl1-003) 116306891-116309685 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009BI_0001ENSG00000016082ENST00000230658ENST00000505475ENST00000511384ENSG00000151883ENST00000281631ENST00000502524ENST00000503046ENST00000503193ENST00000503561ENST00000503665ENST00000503707ENST00000503750ENST00000503790ENST00000503888ENST00000505180ENST00000505554ENST00000505697ENST00000507812ENST00000510040ENST00000510303ENST00000511363ENST00000513414ENST00000513738ENST00000514067ENST00000514342ENST00000515166ENST00000515175ENSG00000240627ENST00000468490ENSG00000249405ENST00000512599ENSG00000250360ENST00000510349ENSG00000259663ENST00000558403ENST00000559112ENST00000601500CIL_0009BI_0002ENSMUSG00000021725ENSMUST00000022239ENSMUSG00000042258ENSMUST00000036060ENSMUST00000176044ENSMUST00000176444ENSMUST00000176812ENSMUST00000177469
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009BI_0001ENSG00000016082ENST00000230658ENST00000505475ENST00000511384ENSG00000151883ENST00000281631ENST00000503561ENST00000503750ENST00000505554ENST00000505697ENST00000510040ENST00000511363ENST00000514067ENST00000514342ENST00000515166ENSG00000240627ENST00000468490ENSG00000249405ENST00000512599ENSG00000250360ENST00000510349ENSG00000259663ENST00000558403ENST00000559112ENST00000601500CIL_0009BI_0002ENSMUSG00000021725ENSMUST00000022239ENSMUSG00000042258ENSMUST00000036060ENSMUST00000176044ENSMUST00000176444ENSMUST00000176812ENSMUST00000177469
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000016082 ENST00000230658 0.013±0.00 N/A N/A 0.022±0.00 N/A 0.203±0.00 N/A N/A N/A N/A N/A 0.017±0.00 3.356±0.97 1.369±0.16
ENST00000505475 0.024±0.00 0.015±0.00 N/A N/A 0.031±0.00 0.712±0.00 N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A
ENST00000511384 N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A N/A 0.034±0.00 3.099±0.00 0.996±0.00
ENSG00000151883 ENST00000281631 N/A 0.849±0.00 N/A 1.239±0.00 1.156±0.00 N/A 0.180±0.00 N/A 1.054±0.00 N/A N/A 0.192±0.00 N/A N/A
ENST00000502524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503561 0.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.487±0.00
ENST00000503790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505554 N/A N/A N/A N/A N/A N/A N/A 0.464±0.00 N/A N/A 0.050±0.00 0.406±0.00 N/A N/A
ENST00000505697 0.851±0.00 3.641±0.00 N/A 1.577±0.36 1.787±0.61 1.518±0.00 0.747±0.00 1.452±0.00 2.791±0.00 4.723±2.87 N/A 1.071±0.34 N/A 2.047±0.00
ENST00000507812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510040 N/A N/A N/A 2.694±0.00 4.705±0.00 2.313±0.00 0.538±0.00 N/A N/A 9.458±0.00 0.128±0.00 2.309±0.00 N/A N/A
ENST00000510303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511363 N/A N/A N/A N/A 0.391±0.00 0.498±0.00 0.176±0.00 N/A N/A 3.457±0.00 N/A 0.823±0.00 1.278±0.00 1.631±0.00
ENST00000513414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514067 N/A N/A N/A N/A N/A N/A N/A 0.910±0.00 0.549±0.00 N/A 0.070±0.00 0.953±0.00 0.693±0.28 N/A
ENST00000514342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.015±0.00 N/A 0.542±0.00 N/A
ENST00000515166 0.809±0.00 N/A N/A N/A N/A 1.097±0.00 N/A 1.606±0.00 N/A N/A N/A 0.839±0.52 1.619±0.30 3.145±0.00
ENST00000515175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240627 ENST00000468490 0.037±0.00 0.080±0.00 N/A 0.088±0.00 0.042±0.00 N/A N/A 0.082±0.00 N/A 0.040±0.00 N/A N/A N/A N/A
ENSG00000249405 ENST00000512599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00
ENSG00000250360 ENST00000510349 N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000259663 ENST00000558403 N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A
ENST00000559112 N/A N/A N/A N/A 0.046±0.00 0.394±0.00 N/A N/A 0.048±0.00 0.029±0.00 N/A 0.084±0.00 0.716±0.17 1.107±0.18
ENST00000601500 N/A N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A 0.005±0.00 N/A N/A 0.041±0.01 0.117±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021725 ENSMUST00000022239 3.604±0.79 1.961±0.71 7.396±0.94 10.008±3.29 4.102±1.61 0.844±0.49 2.426±1.16 3.834±1.17 1.364±1.28 2.916±1.81 3.494±0.65 6.764±3.63 0.621±0.49 1.438±0.85
ENSMUSG00000042258 ENSMUST00000036060 0.095±0.05 2.031±0.32 1.455±0.08 7.201±5.83 0.485±0.29 1.107±0.19 0.080±0.05 0.097±0.05 0.063±0.07 0.336±0.24 0.084±0.04 0.085±0.03 0.073±0.03 0.056±0.02
ENSMUST00000176044 N/A N/A N/A 2.995±2.20 N/A N/A N/A 0.090±0.00 0.042±0.01 0.083±0.02 0.031±0.00 0.148±0.04 0.250±0.06 0.076±0.00
ENSMUST00000176444 0.223±0.14 N/A N/A N/A 1.060±0.13 N/A 0.071±0.00 0.143±0.10 0.097±0.06 0.055±0.00 0.316±0.00 0.389±0.15 0.354±0.00 0.082±0.05
ENSMUST00000176812 0.331±0.13 1.100±0.38 N/A N/A 0.873±0.05 1.608±0.42 0.063±0.02 0.305±0.00 0.168±0.02 0.199±0.00 0.281±0.00 0.546±0.22 N/A 0.095±0.05
ENSMUST00000177469 0.033±0.00 4.950±0.56 N/A N/A 0.146±0.00 2.088±0.60 N/A 0.066±0.04 0.019±0.01 0.062±0.00 0.031±0.01 0.177±0.10 0.068±0.00 0.028±0.01

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