C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 1 polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036493 Atp1a1-001 ENSMUSG00000033161 10090 - 3:101576219-101604603 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036493
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036493 88.747±59.98 183.444±7.53 121.806±4.16 108.220±91.39 49.057±4.39 466.402±40.94 223.646±14.83 1161.168±111.96 71.120±23.33 151.706±11.10 26.151±3.74 203.507±21.24 189.193±41.60 24.893±7.29

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002026 IMP regulation of the force of heart contraction
GO:0002028 ISS regulation of sodium ion transport
GO:0005391 IMP sodium:potassium-exchanging ATPase activity
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005890 IEA sodium:potassium-exchanging ATPase complex
GO:0005901 IEA caveola
GO:0006754 IEA ATP biosynthetic process
GO:0006813 IEA potassium ion transport
GO:0006814 IEA sodium ion transport
GO:0006883 IEA cellular sodium ion homeostasis
GO:0008217 IGI regulation of blood pressure
GO:0010107 IEA potassium ion import
GO:0016020 IEA membrane
GO:0016021 ISS integral component of membrane
GO:0016311 IMP dephosphorylation
GO:0016323 IDA basolateral plasma membrane
GO:0016324 IDA apical plasma membrane
GO:0016791 IMP phosphatase activity
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0030007 IEA cellular potassium ion homeostasis
GO:0030315 IDA T-tubule
GO:0030506 IEA ankyrin binding
GO:0030955 IEA potassium ion binding
GO:0031402 IEA sodium ion binding
GO:0031947 IMP negative regulation of glucocorticoid biosynthetic process
GO:0031982 IEA vesicle
GO:0035725 IEA sodium ion transmembrane transport
GO:0036376 IEA sodium ion export from cell
GO:0042383 IDA sarcolemma
GO:0042493 IMP response to drug
GO:0043234 ISO protein complex
GO:0043531 IEA ADP binding
GO:0043548 IEA phosphatidylinositol 3-kinase binding
GO:0045121 IEA membrane raft
GO:0045822 IMP negative regulation of heart contraction
GO:0045823 IMP positive regulation of heart contraction
GO:0045989 IMP positive regulation of striated muscle contraction
GO:0051087 IEA chaperone binding
GO:0060081 IEA membrane hyperpolarization
GO:0070062 IEA extracellular vesicular exosome
GO:0071260 IEA cellular response to mechanical stimulus
GO:0071383 IEA cellular response to steroid hormone stimulus
GO:0086004 IEA regulation of cardiac muscle cell contraction
GO:0086009 IEA membrane repolarization
GO:1903416 IEA response to glycoside
GO:1990239 IEA steroid hormone binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104950 atp1a3a-001 protein_coding Danio_rerio 0 1832
ENSDART00000005086 atp1a1b-001 protein_coding Danio_rerio 0 1709
ENST00000262623 ATP4A-001 protein_coding Homo_sapiens 0 401
ENST00000295598 ATP1A1-001 protein_coding Homo_sapiens 0 4338
ENST00000302102 ATP1A3-001 protein_coding Homo_sapiens 0 1967
ENST00000369494 ATP1A1-002 protein_coding Homo_sapiens 0 571
ENST00000369496 ATP1A1-201 protein_coding Homo_sapiens 0 4178
ENST00000440951 ATP1A1-006 protein_coding Homo_sapiens 0 619
ENST00000441343 ATP1A3-002 non_stop_decay Homo_sapiens 0 1941
ENST00000479960 ATP1A1-005 processed_transcript Homo_sapiens 0 320
ENST00000488733 ATP1A1-009 retained_intron Homo_sapiens 0 340
ENST00000537345 ATP1A1-202 protein_coding Homo_sapiens 0 4178
ENST00000543770 ATP1A3-007 protein_coding Homo_sapiens 0 1967
ENST00000545399 ATP1A3-008 protein_coding Homo_sapiens 0 1967
ENST00000592131 ATP4A-002 retained_intron Homo_sapiens 0 270
ENST00000602133 ATP1A3-005 protein_coding Homo_sapiens 0 1967

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