C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuronal PAS domain protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000007777 NPAS3-201 ENSDARG00000079182 7955 + 17:9169156-9717503 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000007777
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000007777 9.005±2.18 0.329±0.16 0.184±0.07 0.098±0.00 0.462±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RB CIL_0005RB_0001 CGP 17:8833852-9717503
CIL_0007M4 CIL_0007M4_0003 UCNEbase 17:8937533-9741252
CIL_0005RA CIL_0005RA_0001 CGP 17:9169156-9801699

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101432 Npas3-201 protein_coding Mus_musculus 0 791
ENST00000346562 NPAS3-001 protein_coding Homo_sapiens 2.8026e-45 189
ENST00000356141 NPAS3-004 protein_coding Homo_sapiens 3e-37 161
ENST00000357798 NPAS3-010 protein_coding Homo_sapiens 3e-37 161
ENST00000548645 NPAS3-006 protein_coding Homo_sapiens 3e-37 161
ENST00000551492 NPAS3-005 protein_coding Homo_sapiens 3e-37 161
ENST00000551634 NPAS3-007 protein_coding Homo_sapiens 3e-37 161

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