C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-phase kinase-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000008454 skp1-001 ENSDARG00000003151 7955 - 21:44026863-44034625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008454
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008454 164.887±109.82 207.186±32.60 65.758±65.49 12.834±0.00 102.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000GN CIL_0000GN_0001 CGP 21:43960986-44034625
CIL_00062V CIL_00062V_0001 CGP 21:44026863-44049033

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016301 IEA kinase activity
GO:0016310 IEA phosphorylation
GO:0016740 IEA transferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353411 SKP1-001 protein_coding Homo_sapiens 0 483
ENST00000517625 SKP1-004 protein_coding Homo_sapiens 0 481
ENST00000517691 SKP1-013 retained_intron Homo_sapiens 0.000000005 68
ENST00000521216 SKP1-009 protein_coding Homo_sapiens 0 416
ENST00000522552 SKP1-002 protein_coding Homo_sapiens 0.000000004 68
ENST00000522855 SKP1-005 protein_coding Homo_sapiens 0 481
ENST00000523966 SKP1-010 nonsense_mediated_decay Homo_sapiens 0 412

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