| Transcript ID | Brain | Heart | Kidney | Muscle |
|---|---|---|---|---|
| ENSDART00000009564 | 1.732±0.53 | 0.282±0.00 | 0.241±0.00 | 0.237±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | short stature homeobox 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000009564  |
shox2-001 |
ENSDARG00000075713 |
7955 | - |
15:2171409-2177728  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007KJ | CIL_0007KJ_0003 | UCNEbase | 15:2074843-2373175 |
| CIL_0004JW | CIL_0004JW_0001 | CGP | 15:2171409-2404741 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000976 | IEA | transcription regulatory region sequence-specific DNA binding |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006355 | IEA | regulation of transcription, DNA-dependent |
| GO:0007507 | IMP | heart development |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000029422
|
Shox2-001 | protein_coding | Mus_musculus | 0 | 590 |
|
ENSMUST00000162060
|
Shox2-004 | protein_coding | Mus_musculus | 0 | 281 |
|
ENSMUST00000162098
|
Shox2-002 | protein_coding | Mus_musculus | 0 | 281 |
|
ENSMUST00000162439
|
Shox2-003 | protein_coding | Mus_musculus | 0 | 281 |
