C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000011052 eif3d-201 ENSDARG00000021257 7955 + 3:29792067-29806041 protein_coding

Danio rerio EnsemblZv9

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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000011052
Transcript ID Brain Heart Kidney Muscle
ENSDART00000011052 49.340±12.10 167.620±0.00 156.601±0.00 17.119±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0003743 IEA translation initiation factor activity
GO:0005737 IEA cytoplasm
GO:0005852 IEA eukaryotic translation initiation factor 3 complex
GO:0006412 IEA translation
GO:0006413 ISS translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100484 Eif3d-201 protein_coding Mus_musculus 0 1362
ENST00000216190 EIF3D-001 protein_coding Homo_sapiens 0 1295
ENST00000405442 EIF3D-002 protein_coding Homo_sapiens 0 1295
ENST00000426531 EIF3D-009 retained_intron Homo_sapiens 0 477
ENST00000455547 EIF3D-005 protein_coding Homo_sapiens 0 595
ENST00000458572 EIF3D-010 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000462641 EIF3D-012 retained_intron Homo_sapiens 0 403
ENST00000478547 EIF3D-011 processed_transcript Homo_sapiens 1e-38 163

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