C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458572 EIF3D-010 ENSG00000100353 9606 - 22:36511701-36519501 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverMuscleENST00000458572
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Muscle
ENST00000458572 24.697±0.00 36.098±0.00 7.852±0.00 30.567±0.00 15.257±0.00 11.114±0.00 20.052±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GX CIL_0003GX_0001 CGP 22:36487190-36529436
CIL_0005SO CIL_0005SO_0001 CGP 22:36510850-36703558

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003743 IEA translation initiation factor activity
GO:0005737 IEA cytoplasm
GO:0005852 IEA eukaryotic translation initiation factor 3 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100484 Eif3d-201 protein_coding Mus_musculus 0 797
ENSMUST00000016698 Gm17031-001 processed_pseudogene Mus_musculus 0 246
ENSDART00000011052 eif3d-201 protein_coding Danio_rerio 0 209
ENSDART00000132298 eif3d-001 protein_coding Danio_rerio 0 209

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