C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B lymphoma Mo-MLV insertion region 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000012487 bmi1b-201 ENSDARG00000013076 7955 - 2:20960933-20963658 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000012487
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000012487 7.905±3.79 6.177±3.76 10.163±1.48 0.452±0.00 0.465±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0016568 IEA chromatin modification
GO:0021549 IGI cerebellum development
GO:0031519 ISS PcG protein complex
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182340 Gm5946-001 transcribed_processed_pseudogene Mus_musculus 0 449
ENSMUST00000182652 Gm5946-002 processed_transcript Mus_musculus 0 449
ENST00000376663 BMI1-001 protein_coding Homo_sapiens 0 477
ENST00000416820 BMI1-008 protein_coding Homo_sapiens 0 244
ENST00000417470 COMMD3-BMI1-002 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000442508 BMI1-002 protein_coding Homo_sapiens 0 324
ENST00000443519 BMI1-005 protein_coding Homo_sapiens 4e-24 115
ENST00000456675 BMI1-011 retained_intron Homo_sapiens 0 211
ENST00000602358 BMI1-010 retained_intron Homo_sapiens 0 254
ENST00000602390 COMMD3-BMI1-001 protein_coding Homo_sapiens 0 477

Loading