C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5946
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182340 Gm5946-001 ENSMUSG00000048592 10090 - X:150222366-150223335 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000182340
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000182340 0.179±0.00 0.039±0.00 0.112±0.04 0.017±0.00 0.263±0.23

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000012487 bmi1b-201 protein_coding Danio_rerio 0 449
ENSDART00000135417 bmi1b-001 protein_coding Danio_rerio 0 449
ENST00000376663 BMI1-001 protein_coding Homo_sapiens 0 1304
ENST00000416820 BMI1-008 protein_coding Homo_sapiens 0 448
ENST00000417470 COMMD3-BMI1-002 nonsense_mediated_decay Homo_sapiens 0 813
ENST00000442508 BMI1-002 protein_coding Homo_sapiens 0 608
ENST00000443519 BMI1-005 protein_coding Homo_sapiens 0 521
ENST00000445879 RP11-383C12.2-001 processed_pseudogene Homo_sapiens 0 427
ENST00000456675 BMI1-011 retained_intron Homo_sapiens 0 374
ENST00000463409 COMMD3-BMI1-006 processed_transcript Homo_sapiens 0.000000000000001 88
ENST00000475460 COMMD3-BMI1-004 protein_coding Homo_sapiens 1e-34 150
ENST00000489125 COMMD3-BMI1-005 protein_coding Homo_sapiens 5e-16 88
ENST00000490311 BMI1-007 retained_intron Homo_sapiens 0 660
ENST00000496174 BMI1-006 retained_intron Homo_sapiens 0 353
ENST00000602358 BMI1-010 retained_intron Homo_sapiens 0 536
ENST00000602390 COMMD3-BMI1-001 protein_coding Homo_sapiens 0 1304
ENST00000602395 COMMD3-BMI1-003 retained_intron Homo_sapiens 0.000000000000001 88
ENST00000602523 BMI1-009 retained_intron Homo_sapiens 4e-36 156
ENST00000602524 BMI1-012 retained_intron Homo_sapiens 3e-36 156

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