C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: archain 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000014666 arcn1a-001 ENSDARG00000002792 7955 - 5:32141266-32155663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000014666
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000014666 11.283±5.12 5.426±1.41 12.184±1.55 1.271±0.00 2.693±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003MD CIL_0003MD_0001 CGP 5:32064235-32155663

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006810 IEA transport
GO:0006886 IEA intracellular protein transport
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0016192 IEA vesicle-mediated transport
GO:0030126 IEA COPI vesicle coat
GO:0030131 IEA clathrin adaptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264028 ARCN1-001 protein_coding Homo_sapiens 0 616
ENST00000534182 ARCN1-002 protein_coding Homo_sapiens 4e-19 100
ENST00000614498 ARCN1-201 protein_coding Homo_sapiens 0 311

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