C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: archain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534182 ARCN1-002 ENSG00000095139 9606 + 11:118572436-118603033 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000534182
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000534182 17.790±0.00 17.260±0.00 12.370±0.00 9.223±0.00 15.848±0.00 18.780±0.00 13.680±0.00 14.840±0.00 6.427±0.00 18.823±1.71 11.685±0.62 19.504±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0006890 IEA retrograde vesicle-mediated transport, Golgi to ER
GO:0030126 IEA COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034607 Arcn1-001 protein_coding Mus_musculus 0 540
ENSDART00000014666 arcn1a-001 protein_coding Danio_rerio 4e-19 100

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