C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide sensitive fusion protein attachment protein alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000018625 napa-001 ENSDARG00000020405 7955 + 18:43090645-43113470 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000018625
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000018625 6.783±0.98 26.167±11.74 14.758±3.31 3.419±0.00 24.660±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006181 Napa-001 protein_coding Mus_musculus 0 457
ENSMUST00000028926 Napb-001 protein_coding Mus_musculus 0 462
ENSMUST00000124563 Napa-003 retained_intron Mus_musculus 8.99634e-43 178
ENSMUST00000132828 Napa-004 processed_transcript Mus_musculus 1e-29 134
ENSMUST00000136513 Napb-002 nonsense_mediated_decay Mus_musculus 1e-22 113
ENSMUST00000140647 Napb-003 retained_intron Mus_musculus 9e-23 113

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