C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide sensitive fusion protein attachment protein beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140647 Napb-003 ENSMUSG00000027438 10090 - 2:148706418-148732391 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverOvaryTestisENSMUST00000140647
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Ovary Testis
ENSMUST00000140647 0.186±0.03 0.268±0.10 0.136±0.06 0.086±0.01 0.212±0.05 0.112±0.00 0.155±0.05 0.252±0.09 0.141±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MO CIL_0004MO_0003 CGP 2:148681023-148732467
CIL_00023K CIL_00023K_0002 CGP 2:148693985-148755433

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000018625 napa-001 protein_coding Danio_rerio 9e-23 113
ENST00000377026 NAPB-001 protein_coding Homo_sapiens 0 403
ENST00000398425 NAPB-201 protein_coding Homo_sapiens 0 409
ENST00000432543 NAPB-202 protein_coding Homo_sapiens 0 259
ENST00000468128 NAPB-004 processed_transcript Homo_sapiens 0 409
ENST00000472855 NAPB-002 processed_transcript Homo_sapiens 0 257
ENST00000487502 NAPB-003 processed_transcript Homo_sapiens 0 412
ENST00000617876 NAPB-203 protein_coding Homo_sapiens 0 348

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