C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 1, beta 1 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000022518 ap1b1-201 ENSDARG00000020621 7955 - 5:26426894-26475177 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSDART00000022518
Transcript ID Liver
ENSDART00000022518 0.621±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TY CIL_0004TY_0001 CGP 5:26392340-26481710
CIL_0003VQ CIL_0003VQ_0001 CGP 5:26425431-26538148

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0006897 IMP endocytosis
GO:0008565 IEA protein transporter activity
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030131 IEA clathrin adaptor complex
GO:0035315 IMP hair cell differentiation
GO:0048839 IMP inner ear development
GO:0048884 IMP neuromast development
GO:0050974 IMP detection of mechanical stimulus involved in sensory perception
GO:0090003 IMP regulation of establishment of protein localization to plasma membrane
GO:2000649 IMP regulation of sodium ion transmembrane transporter activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009234 Ap1b1-201 protein_coding Mus_musculus 0 1749
ENSMUST00000101613 Ap1b1-002 protein_coding Mus_musculus 0 1096
ENSMUST00000109897 Ap1b1-001 protein_coding Mus_musculus 0 1096
ENSMUST00000133014 Ap1b1-007 processed_transcript Mus_musculus 0 416
ENST00000317368 AP1B1-002 protein_coding Homo_sapiens 0 1703
ENST00000357586 AP1B1-201 protein_coding Homo_sapiens 0 1703
ENST00000402502 AP1B1-004 protein_coding Homo_sapiens 0 1703
ENST00000405198 AP1B1-001 protein_coding Homo_sapiens 0 1703
ENST00000415447 AP1B1-202 protein_coding Homo_sapiens 0 1703
ENST00000415756 AP1B1-008 protein_coding Homo_sapiens 0 342
ENST00000416196 AP1B1P2-001 unprocessed_pseudogene Homo_sapiens 7e-30 132
ENST00000421126 AP1B1-003 protein_coding Homo_sapiens 0 1663
ENST00000432560 AP1B1-203 protein_coding Homo_sapiens 0 1703

Loading