C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000024058 kcnh2a-001 ENSDARG00000029881 7955 - 2:23695476-23783452 protein_coding

Danio rerio EnsemblZv9

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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000024058
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000024058 0.404±0.22 0.022±0.01 0.097±0.00 0.027±0.00 0.080±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005216 IEA ion channel activity
GO:0005249 IEA voltage-gated potassium channel activity
GO:0005887 IBA integral to plasma membrane
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006813 IEA potassium ion transport
GO:0007165 IEA signal transduction
GO:0008017 IEA microtubule binding
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IBA regulation of ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0055085 IEA transmembrane transport
GO:0071805 IBA potassium ion transmembrane transport
GO:0086091 IBA regulation of heart rate by cardiac conduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036092 Kcnh2-001 protein_coding Mus_musculus 0 881
ENSMUST00000075052 Kcnh7-001 protein_coding Mus_musculus 0 555
ENSMUST00000115098 Kcnh2-002 protein_coding Mus_musculus 0 846
ENSMUST00000126791 Kcnh2-003 processed_transcript Mus_musculus 0 257
ENSMUST00000142197 Kcnh2-004 processed_transcript Mus_musculus 0 267
ENST00000314672 KCNH6-001 protein_coding Homo_sapiens 0 865
ENST00000456941 KCNH6-201 protein_coding Homo_sapiens 0 435
ENST00000580652 KCNH6-003 protein_coding Homo_sapiens 0 532
ENST00000581784 KCNH6-002 protein_coding Homo_sapiens 0 435
ENST00000583023 KCNH6-005 protein_coding Homo_sapiens 0 865
ENST00000583465 KCNH6-004 nonsense_mediated_decay Homo_sapiens 0 865

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