C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily H (eag-related), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115098 Kcnh2-002 ENSMUSG00000038319 10090 - 5:24319589-24329591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115098
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115098 13.385±4.29 4.690±0.87 14.725±0.05 1.930±0.87 3.558±1.19 15.722±4.74 0.870±0.26 0.058±0.03 4.263±0.75 0.558±0.17 13.977±5.79 0.759±0.62 1.881±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008T1 CIL_0008T1_0002 VISTA 5:24041638-24646055
CIL_0004OG CIL_0004OG_0002 CGP 5:24319589-24384474

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000155 IEA phosphorelay sensor kinase activity
GO:0000160 IEA phosphorelay signal transduction system
GO:0005242 IDA inward rectifier potassium channel activity
GO:0005249 IDA voltage-gated potassium channel activity
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0023014 IEA signal transduction by phosphorylation
GO:0042391 IDA regulation of membrane potential
GO:0060307 IDA regulation of ventricular cardiac muscle cell membrane repolarization
GO:0071805 IDA potassium ion transmembrane transport
GO:0086091 IDA regulation of heart rate by cardiac conduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000024058 kcnh2a-001 protein_coding Danio_rerio 0 846
ENSDART00000090874 KCNH7 (5 of 6)-201 protein_coding Danio_rerio 0 750
ENSDART00000151288 KCNH7 (5 of 6)-001 protein_coding Danio_rerio 0 750
ENSDART00000114016 CABZ01076216.1-201 protein_coding Danio_rerio 0 344
ENST00000262186 KCNH2-001 protein_coding Homo_sapiens 0 3319
ENST00000314672 KCNH6-001 protein_coding Homo_sapiens 0 1290
ENST00000330883 KCNH2-004 protein_coding Homo_sapiens 0 3736
ENST00000430723 KCNH2-201 protein_coding Homo_sapiens 0 1736
ENST00000456941 KCNH6-201 protein_coding Homo_sapiens 0 662
ENST00000461280 KCNH2-008 retained_intron Homo_sapiens 0 2143
ENST00000473610 KCNH2-005 retained_intron Homo_sapiens 0 1526
ENST00000532957 KCNH2-002 retained_intron Homo_sapiens 0 1736
ENST00000580652 KCNH6-003 protein_coding Homo_sapiens 0 756
ENST00000581784 KCNH6-002 protein_coding Homo_sapiens 0 662
ENST00000583023 KCNH6-005 protein_coding Homo_sapiens 0 1290
ENST00000583465 KCNH6-004 nonsense_mediated_decay Homo_sapiens 0 1290

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