C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium voltage-gated channel, subfamily H (eag-related), member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000583465 KCNH6-004 ENSG00000173826 9606 + 17:63523359-63546076 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000583465
Transcript ID Placenta
ENST00000583465 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006ZT CIL_0006ZT_0001 CGP 17:63523334-63594266

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001965 Kcnh6-001 protein_coding Mus_musculus 0 2843
ENSMUST00000145539 Kcnh6-004 nonsense_mediated_decay Mus_musculus 0 2344
ENSMUST00000106903 Kcnh6-002 protein_coding Mus_musculus 0 1502
ENSMUST00000036092 Kcnh2-001 protein_coding Mus_musculus 0 1330
ENSMUST00000115098 Kcnh2-002 protein_coding Mus_musculus 0 1290
ENSDART00000024058 kcnh2a-001 protein_coding Danio_rerio 0 865
ENSDART00000084238 KCNH7 (4 of 6)-201 protein_coding Danio_rerio 0 802
ENSMUST00000140695 Kcnh6-003 processed_transcript Mus_musculus 0 725
ENSMUST00000142197 Kcnh2-004 processed_transcript Mus_musculus 0 523
ENSMUST00000126791 Kcnh2-003 processed_transcript Mus_musculus 0 342

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