C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4, gamma 2a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000027616 eif4g2a-201 ENSDARG00000020377 7955 - 7:67327490-67347861 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000027616
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000027616 16.515±8.98 9.444±5.45 20.256±4.47 7.616±0.00 16.559±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000417 CIL_000417_0001 CGP 7:67288488-67347861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0007498 IGI mesoderm development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159305 Eif4g2-004 protein_coding Mus_musculus 0 387
ENSMUST00000160132 Eif4g2-003 protein_coding Mus_musculus 0 542
ENSMUST00000160966 Eif4g2-005 protein_coding Mus_musculus 2.94273e-44 182
ENSMUST00000161051 Eif4g2-002 protein_coding Mus_musculus 0 1127
ENSMUST00000161682 Eif4g2-006 retained_intron Mus_musculus 0 438
ENSMUST00000161736 Eif4g2-007 retained_intron Mus_musculus 0 348
ENSMUST00000162394 Eif4g2-014 retained_intron Mus_musculus 0 198
ENSMUST00000162415 Eif4g2-001 protein_coding Mus_musculus 0 1127
ENST00000339995 EIF4G2-001 protein_coding Homo_sapiens 0 1096
ENST00000396525 EIF4G2-002 protein_coding Homo_sapiens 0 1096
ENST00000524932 EIF4G2-003 protein_coding Homo_sapiens 0 795
ENST00000525681 EIF4G2-008 protein_coding Homo_sapiens 0 1096
ENST00000525972 EIF4G2-013 processed_transcript Homo_sapiens 0 383
ENST00000525995 EIF4G2-018 processed_transcript Homo_sapiens 0 235
ENST00000526148 EIF4G2-006 protein_coding Homo_sapiens 0 1096
ENST00000527419 EIF4G2-015 protein_coding Homo_sapiens 0 292
ENST00000527526 EIF4G2-020 protein_coding Homo_sapiens 0 405
ENST00000528562 EIF4G2-011 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000530211 EIF4G2-012 protein_coding Homo_sapiens 0 398
ENST00000530702 EIF4G2-010 protein_coding Homo_sapiens 0 202
ENST00000531416 EIF4G2-005 protein_coding Homo_sapiens 0 1096
ENST00000531507 EIF4G2-014 processed_transcript Homo_sapiens 0 283
ENST00000531647 EIF4G2-021 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000532082 EIF4G2-004 protein_coding Homo_sapiens 0 907
ENST00000532152 EIF4G2-022 retained_intron Homo_sapiens 0 348
ENST00000532349 EIF4G2-024 retained_intron Homo_sapiens 0 455
ENST00000532383 EIF4G2-007 retained_intron Homo_sapiens 0 344
ENST00000532570 EIF4G2-009 protein_coding Homo_sapiens 0 462
ENST00000533485 EIF4G2-019 retained_intron Homo_sapiens 0 198

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