C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4, gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162415 Eif4g2-001 ENSMUSG00000005610 10090 - 7:111070568-111083030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162415
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162415 59.709±13.96 23.165±3.42 55.364±6.85 91.563±50.75 49.075±6.71 38.324±10.94 64.861±12.39 49.556±5.50 32.081±11.01 45.963±2.23 26.764±7.65 56.743±12.15 37.560±14.94 23.914±8.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000417 CIL_000417_0003 CGP 7:111028951-111083030

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006413 IEA translational initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000079758 eif4g2b-001 protein_coding Danio_rerio 0 1147
ENSDART00000027616 eif4g2a-201 protein_coding Danio_rerio 0 1127
ENSDART00000137887 eif4g2b-002 processed_transcript Danio_rerio 0 294
ENST00000339995 EIF4G2-001 protein_coding Homo_sapiens 0 6093
ENST00000396525 EIF4G2-002 protein_coding Homo_sapiens 0 3024
ENST00000524932 EIF4G2-003 protein_coding Homo_sapiens 0 1411
ENST00000525606 EIF4G2-031 retained_intron Homo_sapiens 0 760
ENST00000525681 EIF4G2-008 protein_coding Homo_sapiens 0 5762
ENST00000525972 EIF4G2-013 processed_transcript Homo_sapiens 0 664
ENST00000525995 EIF4G2-018 processed_transcript Homo_sapiens 0 438
ENST00000526148 EIF4G2-006 protein_coding Homo_sapiens 0 5768
ENST00000527015 EIF4G2-023 retained_intron Homo_sapiens 0 331
ENST00000527419 EIF4G2-015 protein_coding Homo_sapiens 0 468
ENST00000527526 EIF4G2-020 protein_coding Homo_sapiens 0 749
ENST00000528562 EIF4G2-011 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000528839 EIF4G2-029 protein_coding Homo_sapiens 0 573
ENST00000530211 EIF4G2-012 protein_coding Homo_sapiens 0 691
ENST00000530564 EIF4G2-027 retained_intron Homo_sapiens 0 492
ENST00000530702 EIF4G2-010 protein_coding Homo_sapiens 0 512
ENST00000531180 EIF4G2-028 protein_coding Homo_sapiens 0 682
ENST00000531416 EIF4G2-005 protein_coding Homo_sapiens 0 2327
ENST00000531507 EIF4G2-014 processed_transcript Homo_sapiens 0 538
ENST00000531647 EIF4G2-021 nonsense_mediated_decay Homo_sapiens 0 525
ENST00000532082 EIF4G2-004 protein_coding Homo_sapiens 0 1609
ENST00000532120 EIF4G2-026 processed_transcript Homo_sapiens 0 303
ENST00000532152 EIF4G2-022 retained_intron Homo_sapiens 0 675
ENST00000532349 EIF4G2-024 retained_intron Homo_sapiens 0 730
ENST00000532383 EIF4G2-007 retained_intron Homo_sapiens 0 2230
ENST00000532570 EIF4G2-009 protein_coding Homo_sapiens 0 905
ENST00000533485 EIF4G2-019 retained_intron Homo_sapiens 0 329
ENST00000534246 EIF4G2-016 retained_intron Homo_sapiens 0 496
ENST00000534272 EIF4G2-030 processed_transcript Homo_sapiens 0 804
ENST00000534470 EIF4G2-032 retained_intron Homo_sapiens 0 377
ENST00000534605 EIF4G2-025 nonsense_mediated_decay Homo_sapiens 0 261

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