C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4 gamma, 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000339995 EIF4G2-001 ENSG00000110321 9606 - 11:10797054-10809110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339995
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339995 40.957±0.00 26.885±0.00 46.259±25.31 50.037±24.24 64.847±46.79 70.773±36.89 43.084±24.16 36.224±6.33 55.679±39.51 50.067±15.68 65.679±23.52 82.750±10.20 59.757±42.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000417 CIL_000417_0002 CGP 11:10750987-10809110

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA:IDA translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005829 TAS cytosol
GO:0006413 IEA translational initiation
GO:0006446 IDA regulation of translational initiation
GO:0007050 TAS cell cycle arrest
GO:0008135 IDA translation factor activity, nucleic acid binding
GO:0008219 TAS cell death
GO:0016020 IDA membrane
GO:0016281 IDA eukaryotic translation initiation factor 4F complex
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162415 Eif4g2-001 protein_coding Mus_musculus 0 6093
ENSMUST00000161051 Eif4g2-002 protein_coding Mus_musculus 0 3232
ENSDART00000079758 eif4g2b-001 protein_coding Danio_rerio 0 1663
ENSDART00000027616 eif4g2a-201 protein_coding Danio_rerio 0 1096
ENSMUST00000161736 Eif4g2-007 retained_intron Mus_musculus 0 974
ENSMUST00000160132 Eif4g2-003 protein_coding Mus_musculus 0 928
ENSMUST00000161682 Eif4g2-006 retained_intron Mus_musculus 0 715
ENSMUST00000159305 Eif4g2-004 protein_coding Mus_musculus 0 691
ENSMUST00000161079 Eif4g2-012 processed_transcript Mus_musculus 0 641
ENSMUST00000159465 Eif4g2-010 retained_intron Mus_musculus 0 496
ENSMUST00000161158 Eif4g2-011 retained_intron Mus_musculus 0 483
ENSMUST00000163014 Eif4g2-013 protein_coding Mus_musculus 0 477
ENSMUST00000162394 Eif4g2-014 retained_intron Mus_musculus 0 401
ENSMUST00000161790 Eif4g2-008 processed_transcript Mus_musculus 0 381
ENSMUST00000160552 Eif4g2-009 retained_intron Mus_musculus 0 364
ENSMUST00000160966 Eif4g2-005 protein_coding Mus_musculus 0 296
ENSDART00000137887 eif4g2b-002 processed_transcript Danio_rerio 0 294

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