C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH2 domain containing 3Ca
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000029457 sh2d3ca-201 ENSDARG00000028099 7955 + 10:10144145-10244373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000029457
Transcript ID Heart Kidney Liver Muscle
ENSDART00000029457 0.714±0.20 0.686±0.00 0.038±0.00 0.953±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005085 IEA guanyl-nucleotide exchange factor activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074248 Sh2d3c-001 protein_coding Mus_musculus 0 278
ENSMUST00000113242 Sh2d3c-002 protein_coding Mus_musculus 0 278
ENST00000314830 SH2D3C-004 protein_coding Homo_sapiens 0 316
ENST00000373276 SH2D3C-201 protein_coding Homo_sapiens 0 316
ENST00000373277 SH2D3C-007 protein_coding Homo_sapiens 0 316
ENST00000420366 SH2D3C-008 protein_coding Homo_sapiens 0 316
ENST00000429553 SH2D3C-202 protein_coding Homo_sapiens 0 316
ENST00000468969 SH2D3C-009 processed_transcript Homo_sapiens 2e-34 150
ENST00000471939 SH2D3C-001 processed_transcript Homo_sapiens 2e-19 100
ENST00000484160 SH2D3C-011 processed_transcript Homo_sapiens 8e-21 104

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