C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH2 domain containing 3C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000471939 SH2D3C-001 ENSG00000095370 9606 - 9:127742849-127774144 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000471939
Transcript ID Brain
ENST00000471939 0.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0001 VISTA 9:127227593-127829012
CIL_0002CG CIL_0002CG_0002 CGP 9:127731524-127778741

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113242 Sh2d3c-002 protein_coding Mus_musculus 0 715
ENSMUST00000074248 Sh2d3c-001 protein_coding Mus_musculus 0 715
ENSDART00000029457 sh2d3ca-201 protein_coding Danio_rerio 2e-19 100
ENSDART00000144214 sh2d3ca-001 protein_coding Danio_rerio 2e-19 100

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